Scleropages formosus (Asian bonytongue): 108919781
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Entry
108919781 CDS
T04919
Symbol
mex3d
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919781 (mex3d)
04121 Ubiquitin system [BR:
sfm04121
]
108919781 (mex3d)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108919781 (mex3d)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108919781 (mex3d)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108919781 (mex3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
KH_KhpA-B
KH_2
KH_BICC1_1st
KH_DEAH11_2nd
RING_XB3-XBAT31
Prok-RING_4
zf-RING_UBOX
zf-RING_5
PRIMA1
Motif
Other DBs
NCBI-GeneID:
108919781
NCBI-ProteinID:
XP_018583567
UniProt:
A0A0P7VB12
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Position
9:complement(2455125..2462070)
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AA seq
585 aa
AA seq
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MPSPLFDPKIMEAEIVASNQHSGIVVLPGETEPESRDEEALRFALDHLSLIGEKDRGDGG
GMVDPLDSTDTNPESCAALGGGFGGLQLLERPAGSPRSPTSCSPPEDYYYSALGEPGGRK
RSVNMTECVAVPSSEHVAEIVGRQGCKIKALRTKTNTYIKTPVRGEQPVFIVTGRREDVE
MAKREILSAAEHFSMIRASRCKAGSGSAPGALPGPPHLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQQTHTYIVTPSRDKDPVFEVTGMPENVDRAREEIETHITLRTGTFVDLQGDD
FHSNGTDVSLEGLGTMSLGSTLWSRPSRPTPTPPPPPPLPLSLHQSGRKMTSASFTSGGL
GSDPYGGSRGPQESSSPTSPFSTGSGGFSFGSDPAPGLPAADELGFEFTAARIWRPFLNG
TQKQQQQRRNSSGPSGGAITPRLSPTLSADPAALEPPLTRRAQSDPLSTLSWLQAANTTS
FSASSSSSSGGSSTGYSSSSSAGGSPTEPEGSASGAGMLGLFKAGATAESTKDCFVCYES
EVTAALVPCGHKLFCMDCAGQICQSGEPKCPVCHTPATQCIRVFS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcccccttttcgacccaaaaataatggaggctgagatagtagcgagcaaccag
cactccggcatagtagtgcttcccggcgagacggagcccgagtcccgggacgaagaggct
ctccgcttcgccctcgaccacttgtccctcatcggggagaaggaccgcggcgacggcgga
gggatggtggaccccctcgacagcaccgacacgaaccccgagagctgcgctgctttggga
gggggcttcggcggcttgcagttgctggagcgccctgcgggctcccccaggtccccgacg
tcctgctccccacccgaggactactactactcggcgctgggcgagccgggcggccgaaag
cggagcgtcaacatgacggagtgcgtggccgtgcccagctcggagcacgtcgccgagata
gtgggcagacaaggttgtaagattaaggcactgcgcacaaagaccaacacctatatcaag
accccagtacgtggagagcagccggtgtttattgtaactgggcgccgagaggatgttgag
atggccaagcgagagatcttgtctgctgcggagcacttctccatgattcgagcatctcgc
tgcaaggccggcagtgggtctgcacctggagctttaccagggcccccacatctgccgggg
cagactaccatacaggtcagagtcccataccgtgtggtgggtctggtcgtgggccccaaa
ggggctaccatcaagcgtatccaacagcagacccacacctatatcgtaaccccaagccgt
gacaaagatcccgtgtttgaggtgacagggatgccagagaatgtagacagggcacgagag
gagatagagacgcacatcaccttgcgcaccgggaccttcgtcgacctgcaaggagacgac
ttccacagcaacggcaccgatgtcagcctggaaggcctgggcaccatgagcttggggagc
accctgtggtctaggcccagccgtcccaccccgacaccgccaccacccccacctcttccg
ctctcactacaccagtccggccgtaagatgacatcagcctccttcacctctggtgggctt
ggatccgatccgtatggtgggtcacgcgggccccaagaaagcagcagccctaccagccca
ttcagcacaggtagcggtggcttcagctttggcagcgaccctgcgcctggcctgcccgct
gcagacgagcttggctttgagttcaccgctgcccgcatttggagacctttcttgaacgga
acccagaagcagcagcagcagcgccgcaacagtagcggcccgagcggaggtgcaatcacc
ccccgcctgtcacccaccctgtcagcagatccagctgccctggagccgccgctgacccgg
cgtgctcagagtgaccctctgagcaccctctcgtggctgcaggctgctaacaccacatcc
ttctctgcaagcagcagcagcagtagcggtgggagcagcacaggttactcttcctccagt
tccgctgggggttcacctactgagccggaggggagtgccagcggtgccggaatgctgggc
ctcttcaaggcaggggcaaccgcagagtccaccaaggactgttttgtgtgctacgagagc
gaggtgaccgctgcactggtaccatgtggccataaactgttttgtatggactgcgctggt
cagatctgccagtcgggtgaacccaagtgccccgtttgccatacccctgccacgcagtgt
atccgtgtcttctcctag
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