Scleropages formosus (Asian bonytongue): 108919845
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Entry
108919845 CDS
T04919
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108919845 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
108919845 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919845 (lsm7)
03041 Spliceosome [BR:
sfm03041
]
108919845 (lsm7)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108919845 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
108919845 (lsm7)
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108919845 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
108919845
NCBI-ProteinID:
XP_018583654
UniProt:
A0A8C9R6Q6
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All DBs
Position
9:782871..784555
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYLRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMESIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagagaagaagaagaaagagagcattttcgacctgtccaagtacattgac
aagaccatccgagtgaaatttcagggcggtcgggaagccagtggagtcctcaaagggttc
gaccctctgctcaacctggtgctggatggtactatagagtacctgagagaccctgatgat
cagtacaagctaacggaggacacccggcagctgggtttggtggtttgccgcgggacgtcg
gtggttctcatttgtccgcaggatggcatggaatccattccgaacccgttcatccagcag
caggatggctag
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