Scleropages formosus (Asian bonytongue): 108919958
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Entry
108919958 CDS
T04919
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919958
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108919958
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
108919958
NCBI-ProteinID:
XP_018583904
UniProt:
A0A8C9RK86
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Position
14:15899661..15913904
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AA seq
956 aa
AA seq
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MVVELRAPGRQRRPRAAALYPRGASGEAEPQRRWRGPGEPGRAAAAAHIDEPGQREGART
SRDRGRRPSLILPTHRRRARVTLAPDKQLLALKSAVEYELRAVVKVKEHEAEILGTEHNV
MTVWSMVEELKMEKRSQREDTSTSLRNAPDASGESEEGSSSESEAEPMGTRRREPLVSAK
PHRQLCRSPCLDRPSFSQSSTLHELRAEEGRPGSCTPGTEKEYQTKMDFALKLGYSGEQI
EMVLNKLGANALINDFLAELVRLGNKGEVEAQVSGCVSTGTVVTRGPCAKEIASPETSLE
DEADDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKE
QSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVSNDN
YRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQP
CPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCGTGPAGAK
GESGSEAKRVAPKRQSDPSIRSVAREPEERLLVARKPDTSSVPSLVTALSVPTMQPIKSH
AAGALNTRSASSPVPGSSQFTRSSLDHMSSMQYPPILVTNSHGASVSYSEPFAKYDSVGD
HGYCSMLSDFSSVSLGSMHNTDAFYSMEHEHPMYQRNPSPCPEPCLSHSSSDSFSSYGDL
YPSSVDGSLEENAKVHQPSSQGRLPAFAHAFHREALTRVQSYGPEEPKQVLRKQPVSHLA
PHLQHPAVGARSSCPGDYPIPQTAHPSSASQPSRSLGMTRMDSISDSRLYESNPTRQRRP
PLCREQHASWDPLPFATESYGYHSYPLSNSLMQPCCERVMVRSMPERMEQIWRSPWEGLP
TEFHDRQGVPEHQYQTYRNLCNIFPSYIVRSVMEKNPHLTDPQQLAAIIVAKSACR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggagctccgcgcgcccggccgccagcgcaggccccgtgctgcagcgctctat
ccccgcggtgccagcggcgaggctgagccacagcgccgctggaggggcccgggagagccc
gggagagccgcagcggcggcgcacatcgacgagcccggccagcgagaaggcgcgcggacc
agcagagacagagggcggagaccatctcttattttgccgacgcacagaaggagggcgcgc
gtaacgttggccccggacaagcagcttctagctctaaagtcagctgtcgagtatgagttg
cgggctgtggtcaaggtgaaggagcacgaggcggagatcttgggcactgagcacaacgta
atgacggtgtggtccatggtggaggagctgaaaatggagaaacgctcccagagggaagac
acgagcacctcgctgaggaatgccccagatgccagcggggagtcggaggagggcagcagc
tcagagagtgaggcagagccaatggggacccgcaggagggagccgctcgtctccgccaaa
ccgcaccggcagctctgccgctccccctgcctggacaggcccagcttctcccagagcagc
acactacacgagcttcgtgccgaggagggccggcccggcagctgcacacctggcacggag
aaggagtaccagacgaagatggatttcgcgctgaagttgggttactcgggggaacagatc
gaaatggtgctgaacaagctgggagccaacgccctgatcaatgacttcctcgctgagctg
gtcagactgggcaacaagggcgaggtagaggcccaagtgagtggttgcgtcagcacgggc
accgtggtgactcggggcccgtgcgccaaggaaattgccagtccagagacctcactcgag
gatgaagcggatgacacttttgataacttgaggcctatagtcatcgatggctcaaatgtg
gcaatgagccatggaaacaaagaggtattttcttgccgtggcatccagttggcggtggat
tggtttctggagaaaggacacaaagatatcacggtgtttgttccagcttggagaaaagag
cagtccaggcccgacgcccctattacagatcaggagatcttgaggaagctggagaaagaa
aagatcttggtgtttactccttcccggagggtccagggaagaagagtggtgtgttacgat
gaccgcttcatagtcaagctggcctgcgactctgacggcatcattgtgtccaatgacaac
tacagggacctgcagaacgagaagcctgaatggaaaaagttcatagaggagcgtctcctg
atgtactcctttgtgaacgacaagttcatgccgccagatgacccgttgggtagacatggt
ccgagcctggaaaatttcctcagaaagcgtccagtcgtcccagagcacaaaaaacagcca
tgtccatatggaaagaaatgcacttatggacataagtgcaaatactaccatcctgagcgt
gcaaaccagcctcagaggtcagtggccgacgagctacgggcattcgccaagctgtccgcc
gtgaagacaatgagcgaaggagccttggccaaatgcggcacggggcctgcaggtgcgaag
ggtgagagtggttcggaggcaaaacgtgtggctcccaagcgtcagtcggaccccagtatc
cgctcggtggctcgtgagcccgaggagcggctgctagttgctcgaaagccagacacgagc
tccgtaccctcactcgtgacggccctcagcgtgccgaccatgcagcccataaagagccac
gcggccggtgccctgaacacgcggtcggcaagcagccccgtgcccggctcctcccaattc
acgcgcagctccctggatcacatgtccagcatgcagtacccacccatcctggtcacgaac
agccacggcgcctcggtcagctacagcgagcccttcgccaagtatgactcggttggcgac
catggctactgctccatgctgagcgacttctccagtgtaagcctgggcagcatgcacaac
acagacgccttctatagcatggagcacgagcacccgatgtaccagcggaacccgagcccc
tgcccggagccgtgcctcagccactccagcagtgactccttctcctcctacggggacctg
tatccaagctcggtggacggcagtctggaggagaacgcgaaggtccaccagccatcttcg
cagggccgcctgccggcttttgctcacgctttccaccgcgaagctctgacgcgggtgcaa
agctatggccccgaggagcccaagcaggtgttgcgaaagcagcccgtgtcccacctggcc
ccgcacctccagcacccggcagtgggagcccggtccagttgccccggcgactaccccata
cctcagacggcacacccctcgtccgcctcgcagccgagccgctccctgggcatgacccgc
atggacagtatctcggactcgcgcctgtacgagagcaaccccacgaggcagaggcggccc
ccactgtgcagggagcagcacgccagctgggatcctcttcccttcgcaactgaatcctat
ggataccactcgtacccgctgagcaacagcctgatgcagccatgctgcgagcgagtgatg
gtgcgcagcatgcccgaaaggatggagcagatctggcgctctccttgggagggtctgccc
accgagtttcatgaccgccagggtgtcccagagcaccagtaccagacctaccgcaacctc
tgcaacatcttcccctcctacattgtgcgctcagtcatggagaagaacccccacctgact
gatccgcagcagctcgctgccatcatcgtcgccaagagtgcttgccgctaa
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