Scleropages formosus (Asian bonytongue): 108920069
Help
Entry
108920069 CDS
T04919
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108920069
Membrane trafficking [BR:
sfm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108920069
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108920069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Lgl_C
Beta-prop_DCAF4
Synaptobrevin
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108920069
NCBI-ProteinID:
XP_018584061
UniProt:
A0A8C9RT42
LinkDB
All DBs
Position
14:13087670..13193522
Genome browser
AA seq
1238 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNVGGVPLCSSAAGTPTAAPTPRDIEVAETLVSENFQICKTVRH
GFPYQPTALAFDPVQKILAIGSRTGGLRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQKRPAILHSLKFNRECITFCHLPFQSKWLYVGTERGNTHIVNVESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDCPRDEGKLLIGFESGTVVQWDLRTKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTTWNLRNTSRPFQVVFPHGKAQRDGRKPESCKP
ILKVEYKTSKSGEPFVIFSGGLSYDKASRRPALTIMHGKAITVLEMDHPIVEFLVLCETP
YANEVQEPYAVAVLLEKDFIVVDLTQSNYPIFENPYPMDIHESPVTCTAYFADCPPEIIP
ALYSIGAKHKKQGYSHKEWPVSGGTWTLGAQTYPEIIITGHADGSIKFWDASAITLQMLY
KLKTSKAFEKPKAGEVRAVELVEEDPFAVQMVSWCPHSRLFCVVGISAHLILYRFSKYDV
TTEIAALEVRLQCDIEETISPSEAEPNAGLTDPNLQSPQHPPGSPGCATPEGIRDSIPCL
RVKNRPVRMPPGYQAELVVQLLWVDGEPPQQITSLDINSAYGLLALGNCNGLAVVDYIQK
TVLLCMSTLELYGSSDPYQRLTRSPRKSRQFAAGSGSGAGAGAGAGYCPTSTPLSTHSTD
NICMRGLSNFYSDSKKRIRTSYQSLTELSDNQVSLELERSRSPTSDHVNGHCTSPTSQPY
SAGRPRLPCPEGPKLSRRGPSRPPFRKAQSAACMEVSLPASHTEGCASRRAMLQQLHGFS
MYSHDEQHTTAYTWNERESRENSFSRSRSSSVSSIDRETKEAVTTLRFMESYARKVDAVS
SPCLWVGTSLGVVLVIALSIPMDEEERQEEPVTVMPSGTVLMLKGSVLTFGSLDCSGGLI
SNPYEVWRDPHAPEDPDCPRRRKLVNFSPSSSQDAAGEGHLVVVCSEKQAKVFLMPAQTR
LYVHHITESSFVLRADVVSVCNSVCLACFCANGHVMTLSLPSLRPLLDVNYLPLTDMRIA
RTFCFADGGQALYLSSPTEIQRISYTQEMCDSLQDMLGELFTPVETPEAQNKGFLKGFFG
GNAQTFDREELFGEAAAGKASRSLAQHIPGQGSIEGMKAAAGGVVGDLARARLAAEERGQ
RLGELEERTALMMSSAEMFSKHAHELMLKYKDKKWYQF
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggttctggacggactgaccacctcctctccggtgaacgtcggc
ggcgtcccgctgtgcagcagcgcggccggcactccgaccgcagcgcccactcccagagac
atagaggtggcggaaacactcgtgtctgagaactttcagatctgcaagacggtccgccat
ggattcccataccagcccactgccctggcatttgaccctgttcagaaaatccttgccata
gggtctcgaacaggtggcctacgaatactgggacgaccaggagtggactgctactgccaa
cacgagagtggagctgctgtccttcagctacaattccttatcaacgagggggctctcgtc
acagcctgtgcagatgacacactccacctctggaacttgcgacagaagcggccagctatt
ttgcattcactcaaattcaacagagaatgcatcacgttctgccacctcccattccagagc
aaatggctgtatgtgggcacggagcgtgggaatacacacatcgtcaacgtcgagtccttc
gtcctgtctggatacgtcatcatgtggaacaaggccatcgaactatcaactaaaactcat
cctggacctgttgttcatctgagcgactgcccacgggatgaaggcaaactcctgattggg
tttgagagtggcacagtagtacagtgggacctcagaacaaagaaagctgactttcggatc
tattacgatgaggccatccactcagtgagttggcaccacgaaggaaagcagttcatgtgc
agccattcagatggcagtctcaccacgtggaacctgagaaacacctctagacccttccag
gttgtcttcccccatggtaaggcccagagggatggaagaaaacctgaatcgtgtaagccc
atactgaaagtggaatacaaaacctcgaaaagcggtgagcccttcgtgatcttctctggg
ggactgtcctatgacaaggccagcaggagacctgctctgaccatcatgcatggcaaggcc
atcactgttctggagatggaccatcctatcgtggagtttctggttctctgtgagacacca
tatgctaacgaagtccaagagccatatgcagtggcagttttgctggagaaggacttcatt
gtggtggatcttacacagagcaactaccccattttcgagaacccttatcccatggacatt
catgaatctccagttacctgcacagcatattttgcagattgccctcctgaaatcatccct
gccctctattccataggtgccaaacacaaaaaacagggctacagccataaggaatggcca
gtgagtggaggcacatggacgctgggtgctcagacctaccctgagatcatcatcacaggg
cacgcagatggatcaatcaagttttgggatgcttctgccatcaccctccagatgctgtac
aagctgaaaacttcaaaggctttcgagaagccaaaggcaggggaggtgcgggctgtggaa
ctggtggaggaggaccccttcgccgtgcagatggtcagctggtgcccccacagccgcctc
ttctgtgtggtgggcatatccgcccacctcatcctataccgcttcagcaagtatgatgtc
accactgaaatcgctgctctggaagtgcgtctgcagtgtgatatagaggagaccatctct
ccgtcagaagccgaacctaatgctggtctcacagatccaaacctgcagtcaccccagcac
cccccgggaagcccaggatgtgctacccccgagggcattcgggatagcatcccctgtctc
cgagtgaagaaccgaccagtgcgtatgcccccaggatatcaggctgagctggttgtgcag
ctcctatgggttgatggggaacctccacaacaaatcaccagtctggacataaactctgcc
tatggcctactggctctgggcaactgcaatgggttggctgtggtggactatattcagaag
acagtcctgctctgcatgagtacgctggagctgtatgggtccagtgacccctaccagagg
ctcacccgctctccccgcaagagccgacagtttgctgcaggttcgggttctggtgctggt
gctggtgctggtgctggctactgtccaacttctactcctctctccactcactccacagac
aacatttgcatgcgcggcctgtctaacttttattcagattcaaagaaaaggatccgtacc
tcttaccagagccttacggaactatcagacaaccaggtttccttggagctggaacggagc
aggtcgcccacatcagatcatgtcaatggacattgcactagccccacctcccagccctac
agcgctggcaggcctcgcctcccctgccccgaagggcccaagctgagccgccgtgggccc
agccgaccgcccttccgaaaggcccagtccgccgcttgcatggaggtctcgttgcctgct
tcccacacggaaggctgtgcttccaggcgggcaatgcttcagcaattgcacggattcagt
atgtactcgcacgatgagcagcacaccaccgcgtacacctggaacgagagagagagccgc
gagaactcgttcagccgctcccgcagctccagcgtctccagcattgaccgtgagaccaag
gaggcggtcactacgctgcgcttcatggagtcctacgcccgtaaggtggatgccgtgtcc
tcgccgtgcctatgggtgggcaccagccttggggtcgtgcttgtcattgccctctccatc
cccatggatgaggaggagcgccaggaggagcccgtcacagtgatgcccagcggtacagtg
cttatgctgaaaggctcagtcctgacgtttggctctttggactgttctggaggcctgatc
tccaacccttatgaggtgtggcgggacccccacgcccccgaagacccggattgcccccgc
aggcgcaagctggtcaacttctccccctcatcgtcacaggatgcagccggggagggacac
ctggtcgtagtgtgctcagagaagcaagccaaggtgttcctcatgccggcacagacccgc
ctctacgtgcaccacatcaccgagtcctccttcgtcctgcgtgccgacgtggtgtctgtc
tgcaacagtgtctgcctggcctgcttctgtgccaacgggcatgtgatgaccctcagccta
cccagcctcaggcccctgctggatgtgaactaccttccactgacggacatgcgcatcgcc
cggacattctgctttgccgatggtggacaggccctctacttgagctcccccactgagatc
cagcgtatctcctatacgcaagaaatgtgtgatagcctgcaggatatgctgggggaactg
ttcacacctgttgagacccccgaggcgcagaacaagggtttcctgaaaggcttctttgga
ggcaatgcacagacatttgacagggaagagctgtttggtgaggctgcagcaggcaaggcc
tctcggagcctggctcagcatattccaggccagggcagcatagagggcatgaaggcagct
gctggaggggtggtgggagacctggccagggctcgcctggcagctgaggagaggggacaa
aggctgggggagctggaggagcgcaccgccctcatgatgtccagtgcggagatgttctcc
aaacatgctcacgagctaatgctgaaatacaaggacaagaagtggtaccagttttga
DBGET
integrated database retrieval system
