Scleropages formosus (Asian bonytongue): 108920118
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Entry
108920118 CDS
T04919
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108920118 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108920118 (polb)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108920118 (polb)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
108920118 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108920118 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH_3
NTP_transf_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
108920118
NCBI-ProteinID:
XP_018584158
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All DBs
Position
21:complement(24885989..24894119)
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AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYEKNVNRAIHKYNAYRKAASVIAKYPEKIKSGAEAK
KLDGVGAKIAEKIDEYLATGKLRKLEKIRSDDTSSSISLLTRVTGIGPAAARKFVEEGVK
TLDDLRKVEHKLNHHQKIGLKYFEDFEKRIPRVEMEKMEALIHGELKLLDSEYIGTICGS
YRRGAASSGDIDILLTHPSFTSQSEKQPRLLHAVVDHLESVGFITDTLSKGDTKFMGVCQ
LDRGEEEEEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIRP
LGVTGVAGEPLLVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagaaaggcgccgcaggaaacgttaaacgaaggaattacagacttcctaatc
gagttggccaactatgagaaaaacgtgaacagggccattcataagtacaacgcttacagg
aaagcagcttctgttattgccaagtacccagagaaaatcaaaagtggcgccgaagccaag
aaattggatggagtcggagcaaaaatagctgaaaaaattgacgagtacttggccacagga
aagctaagaaagttggaaaagatccggagcgatgacaccagcagctccatcagcttactt
accagggttacaggcataggaccagccgctgctcgcaaatttgtggaagagggtgtgaaa
actctggatgatttaaggaaggttgaacacaaactcaatcaccaccagaagattggactc
aagtactttgaggactttgaaaagagaattccacgtgttgaaatggagaagatggaggct
ctaattcatggggaattgaagctgctggactctgaatacattgggaccatctgtggaagc
taccggcgaggagctgcgtccagcggggatattgacatcctgttaactcacccaagcttc
acctcccagtctgagaaacagcccagactcttgcatgccgtagtggatcacctggagtca
gtcggcttcatcaccgatactctgtcaaaaggagacaccaagttcatgggtgtgtgtcag
ctggatcgtggtgaggaagaggaggaatatcctcaccgccgcattgacatcaggttaatt
cccaaggatcagtactactgtggtgtgctctacttcactgggagtgacatctttaacaag
aacatgagaactcacgctttggagaagggcttcactcttaatgaatacactatccgtccg
ctaggagtcactggtgtagcgggagagccgctcctcgtggacagtgagaaggacatcttc
gactacatccagtggaaatacagagaacccaaggatcgcagcgagtaa
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