Scleropages formosus (Asian bonytongue): 108920174
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Entry
108920174 CDS
T04919
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04142
Lysosome
sfm04144
Endocytosis
sfm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108920174
04142 Lysosome
108920174
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108920174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108920174
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108920174
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108920174
Exosome [BR:
sfm04147
]
Exosomal proteins
Proteins found in most exosomes
108920174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_PEP5_VPS11
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
108920174
NCBI-ProteinID:
XP_018584250
LinkDB
All DBs
Position
21:24983541..25023554
Genome browser
AA seq
1671 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDMNDPVN
LIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMAEEVVFWKWVSVNTIA
LVTETAVYHWSMEGDSQPVKMFDRHASLAGCQIINCRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKVEGNAKPSTLFCFAVRNQAGGKLHIIEVGQPVAGN
HPFAKKAVDVFFPPEAQTDFPVAMQIGMKHGVIYLITKYGYIHMYDLETGVCIYTNRISA
ETIFVTASHEPTSGIIGVNKKGQVLSVCLEEENIVNYATSVLQNPDLALRMAVRSNLSGA
EELFARKFKTLFAQGNYSEAAKVAASAPKGILRTADTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNRFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSTDSTLALSVYL
RANVPNKVIHCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRVSPEQGLQFAQMLVQDE
EPLANMNQIVDVFMESSLIQQCTSFLLDALKNNRPTEGHLQTRLLEMNLIHAPQVADAML
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQTLVELFESFKSYEGLFYFLGSIVN
FSQDSDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNASRLPVVIGGLLDVDCSEDVIKNLIMVVQGQF
STDELVAEVEKRNRLKLLLPWLEFRIHEGCEEPATHNALAKIYIDSNNNPKRFLKENPFY
NSAVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPEVWANVL
EENNLYRRQLIDQVVQTALSETQDPEEVSVTVKAFMMADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYVNRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAECCNEPPVWSQLARTQLQKELVKEAIDSYIKADDPSAYMEV
VSAASKNSNWEDLVKFLQMARKKARDSYVETELIFALAKTNRLSELEEIVSGPNNAHIQQ
VGDRCYEDSMYDAAKLLYNNVSNFARLASTLVRLGEFQAAVDSAHKANSTRTWKEVCFAC
VDGAEFRLAQMCGLHIVIHADELEELISYYQDRGYFYELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAVEQAHLWAELVFLYDKYEEYDNAVITMMN
NPTDAWKGGQFKDIIAKVANVELYYKSLRFYLEYKPLLINDLLAVLSPRLDHTRAVNFFS
KMGQLQLVKPYLRSVQSHNNKAVNEALNNLLTEEEDFQGLRASIDAYDNFDNISLAQRLE
KHDLIEFRRIAAYLYKDNNRWKQSVELCKKDCLYKDAMLYAAESQDAELTEMLLRWFLEE
GKKECFAACLFASYDLLHPDVVLELAWRHNIVDFAMPYFIQITREYLTKVDKLDSLESQR
KTEEVSEPTPAVFGQQLMLTAGSTAAPPQPAFPGYGYPAPGYTQPAYGFNM
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactccccatacgctttcaggaacatctgcagctgcagaacctgggggtg
aatccggccaacattggtttcagctacttgacgatggagtcagacaaattcatctgcatc
cgggagaaggtgggggaccagaaccaggtggtcatcgttgacatgaatgaccccgtcaac
ctgatccgtcggcccatttctgccgacagtgctatcatgaacccagccagcaaggtcatc
gccctcaaagctgccaagacactgcaaatcttcaacattgagatgaagagcaagatgaag
gcccacaccatggctgaggaggtggtgttctggaagtgggtctctgtgaacacgattgcc
ctggtcaccgagaccgccgtctaccattggagcatggagggagattcacagccagttaag
atgtttgaccgccacgccagcctggcagggtgccaaatcatcaactgtcggacagatgag
cagcagaaatggctgttgcttataggtatctctgcgcagcaaaaccgtgtggtgggtgcc
atgcagctgtactctgtggacaggaaggtctcccagcccattgagggtcacgctgccgct
ttcgccgagttcaaggtagagggcaatgccaagccctcaactctgttttgttttgccgtg
agaaaccaagcagggggcaagctgcatattatagaagtaggccagccagtggcagggaat
catccgttcgcaaagaaagcagtggatgtgttctttcctccggaggcacagactgacttt
cctgtggctatgcagattggcatgaaacacggagtcatctacttgatcacaaagtatggc
tacattcacatgtatgacctggagactggtgtgtgcatctacacgaaccgcatcagtgct
gagaccatcttcgttacagcttctcatgagcccacttccggcatcattggtgtcaataaa
aagggccaggtgctttccgtctgcttggaggaggagaacattgtgaactacgccaccagt
gtgcttcagaacccagatttggctctgcgtatggctgtccgcagcaatctgtccggtgct
gaggagcttttcgcccgaaaattcaagactctgtttgcccaaggcaactactctgaggcc
gccaaagttgctgcctctgcgcccaagggaatcctacgtactgccgacaccatccgcaag
tttcagagcgtgccggcgcagcccggccaggcctctccactactgcagtattttggcatt
ttgttggaccagggtcagctcaaccgctttgagtctctggagctgtgccgccctgtgcta
cagcagggacgtaagcagctcctggagaaatggctcaaggaggacaagcttgaatgctca
gaagagctgggagaccttgtaaagagcactgactccaccctggcactcagcgtctacttg
cgtgctaatgtccccaacaaggttattcactgctttgccgagacaggccagttccagaaa
atagtgctttatgccaaaaaggtgggttacactccagactggatcttcctgctgaggaat
gtgatgcgggtgagtccagagcaaggcctgcagtttgctcagatgttggtccaagatgag
gagcccctggctaacatgaaccagattgtggatgtgttcatggagagcagcttgatccag
caatgcacgtcctttctgctcgatgctctgaagaacaaccgaccgactgagggtcacctg
caaacacgcctgctggagatgaacctcatccatgccccacaggttgctgacgccatgctg
gggaaccagatgtttacacattatgaccgcgcccacgttgcccagctgtgcgagaaggca
gggctcctccagagggctttggaacactatacggacctctatgacatcaagcgtgctgtg
gtgcacacacacctgcttaatccagagtggcttgtgaactttttcggctccttgtcagtg
gaggactccttggagtgtctgcgggccatgctgtcagccaacatccgccagaacctgcag
ctttgtgtgcaggtggcctccaagtaccacgagcagcttgggacgcagactctcgtcgag
ctttttgagtccttcaagagctatgaagggctcttctacttccttggttccattgtcaat
ttcagccaggactctgatgtccacttcaagtacattcaggctgcgtgcaaaacggggcaa
attaaagaggtggagcggatctgccgggagagtaactgttacgacccagatcgcgtgaaa
aactttctcaaggaggccaagttaacagaccagctaccactgatcatagtgtgcgaccgg
tttgactttgtccatgacctcgttctctacttgtaccgcaacagcctgcagaaatacatt
gaaatctatgtccagaaggtgaacgcaagccgactgccagtggtcatcgggggcttgctg
gacgtggactgctcggaggatgtgatcaagaacctcatcatggtagtgcagggccagttc
tccactgatgagctggtggctgaagttgaaaagaggaaccgactgaaactgctgctcccc
tggctggaattcaggatacatgaagggtgtgaagagccagcgacccataatgccctggcc
aagatctacatcgacagcaacaacaaccccaagcgcttcctcaaagagaaccccttctac
aacagtgcagtagtgggcaagtactgtgagaagagggaccctcacctggcctgcgtggcc
tatgagagaggacagtgtgacctggagctcattaaggtgtgcaatgagaactcgctcttc
aaaagtgaggcccgctacctggttcgccgaaaagatccagaagtgtgggcaaacgtgttg
gaggagaacaatctatacaggcgccagctgatcgaccaggtagtccagactgcactgtcg
gagacccaggacccagaggaagtgtctgtgacagttaaagccttcatgatggctgaccta
cccaatgagttgattgaactgctagagaagatcgtcctggacaactcggtcttcagtgag
caccgaaacctccagaacctcctgattctaacagctataaaagccgatcgtacccgcgtc
atggaatacgtaaaccgtttggataactatgatgcccccgacattgccaacattgctatt
agtaacgagctctttgaggaagcctttgctattttccggaagtttgacgtcaatacctcc
gccattcaggtcctgattgaacatatcggcaacttggatcgagcctacgagttcgctgag
tgctgcaacgagccgcctgtgtggagccagctggccaggacacagttgcagaaggagctt
gtcaaggaagccattgactcctacatcaaggcagacgacccttcggcctacatggaggtg
gtcagtgctgccagcaaaaacagtaactgggaagacctggtgaaattcctgcagatggct
cggaagaaggcccgggactcctacgtggaaacggagctcatctttgccttggctaagact
aaccgactctcagaactcgaggaaattgtgagcggccctaacaatgctcacatccagcaa
gtgggcgaccggtgctacgaggacagcatgtacgacgcagccaagctcctgtataacaac
gtgtccaacttcgcccggctggcctccacattggttcgcttgggggagttccaagccgct
gtggacagtgcccacaaggccaacagtacgcgcacctggaaggaggtgtgttttgcctgc
gtcgatggagcagagttccgacttgcccagatgtgtggtttgcacatcgtcatccatgct
gacgaactggaggagctcatcagctactaccaggaccggggctacttctacgagctcatt
gcccttctggaggcagcactgggcttggagcgtgcccatatgggcatgttcaccgagctc
gccattctctactcaaagttcaaaccccagaagatgagagagcatctggagctcttctgg
tcccgagtcaacattcccaaggtacttcgagctgtggaacaagctcacctgtgggcagag
ctcgtgttcctctacgataaatatgaagaatatgataatgcggtcattacgatgatgaac
aatcccactgatgcttggaaagggggacagttcaaggacatcattgccaaggtagcaaat
gtagaactgtactacaaatccctgcgcttctacctggagtacaagcccctcctaataaat
gacctgttggctgttctctccccccgactggaccacacaagagcagtaaactttttctcc
aagatgggccaactgcaactcgtcaagccttacctgcgttctgtgcagagccacaacaat
aaagcggtgaatgaagccttgaacaacctgctaactgaagaggaggacttccagggtctc
cgggcatctattgatgcatatgacaacttcgacaacatcagcctggcacagaggctggag
aagcatgatctgatcgagttccgacgtatcgctgcttacctgtacaaggacaataaccgc
tggaagcagagcgtggaactttgcaagaaggactgcctttataaggatgccatgctgtac
gcagcagagtctcaggacgcggagctgacggagatgcttctgcggtggtttctcgaggaa
ggcaagaaggagtgcttcgctgcgtgcctcttcgcctcctacgacctgctccaccccgat
gtagttctggagctggcctggaggcacaacatcgtagactttgctatgccttacttcatc
cagatcacgagggagtatttgaccaaggtggacaaactggactcgttggaaagccaaagg
aagactgaagaagtgagcgaaccgactcctgctgtgtttggccagcagctgatgttgaca
gccgggtccaccgctgcgcctccacagcccgccttcccgggttatggatacccggcgcct
ggctacacccagcccgcctatggcttcaacatgtaa
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integrated database retrieval system
