Scleropages formosus (Asian bonytongue): 108920178
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Entry
108920178 CDS
T04919
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03440
Homologous recombination
sfm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108920178 (top3b)
03460 Fanconi anemia pathway
108920178 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108920178 (top3b)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108920178 (top3b)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108920178 (top3b)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Topoisomerases
108920178 (top3b)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108920178 (top3b)
FA (Fanconi anemia) pathway
108920178 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
108920178
NCBI-ProteinID:
XP_018584258
UniProt:
A0A8C9V4H0
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Position
21:complement(24728574..24748330)
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AA seq
863 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSTRKGFNGACSVHEYTGIFMGQSVRFKMTSVCGH
VMSLDFTGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDIVVLWLDCDK
EGENICFEVLDAIQPVMNKAYSGERSVYRAKFSSITDTDICNAMNRLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKDKDSPVMLDWERVRVFDREVGQMFVNIAKASREAWVDSVNKKEKAKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGTLRQQTNN
PFWGDAVKTLLAEGVNRPRKGTDAGDHPPITPMRAASESELGSDGWRLYEYITRHFIATV
SHDCKYLQTTISFTIGSEAFSCTGKTLISAGFTEVMPWLGIVDEESLPTCEKGDSFTVEE
VKLVEKQTGPPDYLTESELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANFQQVLQHTLDIFKRKFHYFVDSI
ASMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDDFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLSS
LGIGQCVECENGVLVFDPTSGPKWKMACNRCNVVVNFFEHAHRVQVSADSCEACEASLVV
VDFNKARSPLPGDETQHSGCVFCDPVFQDLVELKHATMRHPMHRGGQARRQGGRGRARGR
RPGSRGNPKKPKDKMAALAAYFV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgttctcatggtagcagagaagccgtctctggcccagtcaatcgcaaaaatc
ctctctaaaggcagctgcagcacgcgtaaaggtttcaatggcgcatgctctgtgcacgag
tacactggcatcttcatgggtcagtcagtccgcttcaagatgacatctgtgtgcgggcat
gtgatgagcctggatttcacaggaaagtacaacaactgggacaaggtcgaccctgctgag
cttttcagcaaggcacctacagagaagaaagaggcaaatcccaagttgaacatggtcaag
ttcttacaggttgaagcaaaaggttgtgacattgtagttctttggctggactgtgacaaa
gaaggagagaacatctgttttgaggttctggatgcgatccagccggtgatgaacaaagcc
tacagcggggagaggagtgtgtaccgggccaagttcagctctatcactgacacagacatc
tgtaacgcgatgaaccggctgggggagcccaaccgcaatgaggcactgtctgtggatgcc
aggcaggagctggacctgcgcatcggctgtgccttcaccaggttccagaccaaatatttc
caggggaaatatggcaacctggactcctccctaatttcatttgggccttgccagactcca
accctgggcttctgtgtggaacgccatgacaaaatccagtccttcaagccagaaacatac
tgggtcatccaagccaaggtgttcaaagataaagacagccccgtaatgctggactgggaa
cgggtgcgagtctttgacagagaagttggtcagatgtttgtcaacattgcaaaagcatcg
cgggaggcctgggtggattctgtgaacaaaaaagagaaggcaaagcagagaccccttgct
ttgaatacagtggaaatgttgagggtggccagcgctgcgcttggtatgggccctcagcat
gccatgcagatagcagagcgactgtacacccagggctacatcagctaccctcgcacggag
accacccactacccagaaaactttgacctcaagggcaccctgcggcagcaaaccaacaac
ccattttggggagatgctgtgaaaacgttacttgcagagggagtaaatcgccccaggaag
gggacggatgcaggggaccaccccccaatcacccccatgagagctgcttctgagagcgag
ttgggaagtgacggatggcgtctgtatgagtacatcacacggcacttcattgcgactgtc
agtcacgactgcaagtacctccagacgaccatctccttcaccatcggctcggaagccttc
tcctgcacaggaaaaactctcatatcagctggcttcacggaagtcatgccctggctgggg
attgtggatgaagagagcttgccgacctgtgagaaaggggactccttcacagtggaggag
gtgaaactggtggagaagcagactggtcctcctgactacctgacggaatccgagctcatc
acgctgatggagaagcacggcattggaacggacgccagcatccctgtgcacatcaacaac
atctgccagaggaactatgtcacggtggagagtggccggaggcttaaacctaccaacctg
ggcattgtgctggtgcacggttactacaagattgatgctgagctggtgttgcccaccatc
cgcagcgcagtggagaaacagctcaacctgatagcacagggcaaggctaatttccagcag
gtgctgcagcacaccctggacatcttcaagaggaagttccactactttgtagactccatt
gcaagtatggatgagttaatggaagtctccttctcaccaattgccgccacagggaagcca
ctttcccgctgtgggaagtgtcatcgattcatgaagtacattcaggccaagcccagtcgg
ctgcactgctcccactgcgatgagacctacagtctgccacagaatggtgccatcaagctg
tacaaggagctgcgctgtccgctggatgactttgagctggtgctgtggacatcaggctcg
cgggggaagagctacccgctgtgcccttactgcttcagcaacccccccttcagggacatg
aagaaaggtatgggctgcaatgagtgcactcacccctcttgccagcactcgctgagctct
ctgggcatcggccagtgtgttgagtgcgagaacggcgttctggtgtttgatcccacttct
gggcccaagtggaagatggcatgcaacaggtgcaatgtggtggtgaatttttttgagcac
gcccacagggtgcaggtgtctgcagacagctgcgaggcctgcgaggcctccctggtggtg
gtggacttcaacaaagcgcgctcaccactgccaggagatgagacccagcatagtggctgc
gtcttctgtgaccccgtgttccaagacctcgtggagctcaagcacgccaccatgaggcac
cccatgcaccgtggaggccaagcccgcagacaagggggacgggggagggctcgaggtcgc
cggccaggcagcaggggcaatccgaagaaacccaaagacaagatggcggccctagcagca
tactttgtgtag
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