Scleropages formosus (Asian bonytongue): 108920304
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Entry
108920304 CDS
T04919
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04145
Phagosome
sfm04814
Motor proteins
sfm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108920304
09142 Cell motility
04814 Motor proteins
108920304
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108920304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108920304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfm04812
]
108920304
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108920304
Cytoskeleton proteins [BR:
sfm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108920304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108920304
NCBI-ProteinID:
XP_018584456
LinkDB
All DBs
Position
21:complement(9038314..9058153)
Genome browser
AA seq
635 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQKKEIVPPQDDSDLEKKRREAE
ALLQSIGITPEASVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGPRTLHWDSDPSALQLHS
DLGRGPLKLGMAKITHVDFPPREIVSYTKETQTPVMTQQKEEEDDDEEVAPLQPVQQPQE
EKPAQKEEEEATPRELTEEEKLQILHSEEFMTFFDHSARIVERALSEQVDVFFDYSGRDL
EDKEGEIQAGAKLCLNRNFVDERWSRHRVVTCLDWSPQYPELLVASYNNNEDAPHEPDGV
ALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQR
TPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQSDSDPSLTQDSLE
LVFKQSKAVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGIH
CHTATGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACV
DGVGHLDLWNLNNDTEVPTASITVEGNPALNRVRWAHSGREVAVGDSDGQILIYDIGEQI
AVPRNDEWTRFARTLAEIHDNREDAEELAAQRLPA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaagagtgagctgaaggcagagctggaaaggaagaagcagcgcctggcgcag
atccgggaggagaagaagaggaaggaggaggaacggaaaaagaaggaggcggaccaaaaa
aaggagattgtgccaccccaggatgactcggacctggagaaaaagaggcgggaggcggag
gcccttctgcagagcatagggatcactccagaggcgtctgttgtccctccgcccatgtcc
cccacctccaagtcggtgggcacgccaagcgaggcggggagccaggactctggggatggc
gccgtgggacccaggactctgcactgggactctgacccgtctgctctccagctgcactct
gatctgggacgaggacccctgaagctgggcatggccaagatcacccacgtggacttccct
ccgcgggagatagtgtcctacaccaaggagacgcagacccctgtgatgacacagcagaag
gaggaagaagacgacgatgaggaggtagccccgctccagccagtgcagcagccccaggag
gagaaaccagctcagaaggaagaagaagaagccaccccccgtgagctgacggaggaggag
aagctgcagatcctgcactcagaggagttcatgaccttcttcgaccacagcgcccgcatc
gtggagcgcgccctttctgaacaagtggacgtgttctttgactacagtggccgggacttg
gaggacaaggagggggagatccaggctggggccaaactgtgtctgaacaggaactttgtg
gatgagcgctggtccaggcaccgtgtggttacctgtctggactggtccccccagtacccc
gagctgttggtcgcttcctacaacaacaacgaggatgccccccacgagccggacggcgtg
gcactggtgtggaacatgaagtacaagaagacgacgccggagtacgttttccactgccag
tctgccgtgatgtccgctgccttcgccaagttccaccccaacctggtggtggggggcacc
tactcagggcagatcgtgttgtgggacaaccgcagcaacaagaggacccccgtgcagcga
acccccctgtctgcagctgcgcacacgcaccctgtgtactgcgtgaatgtggtgggcacc
cagaacgctcataatctcatcagcatctccacggatgggaagatgtgctcctggagcctg
gacatgttgtcgcagccacagagtgattcagacccctccctcacacaggacagcctggag
ctggtgttcaagcagtccaaggcggtggccgtcacctccatgtccttccccctcggagat
gttaacaactttgtggtggggagcgaggacggctctgtctacaccgcatgtcgtcatgga
agcaaagcagggatcagtgagatgtttgagggacaccacggacccatcacgggcatccac
tgccacactgccaccgggcccctcgacttttcccacctctttgtcacctcttccttcgac
tggaccgtcaagctctggagcaccaagaataacaaacctttgtactcgtttgaggacaac
tcggactacgtttatgacgtcatgtggtcgcctacccaccccgccctgtttgcctgcgtg
gatggagttgggcacctcgacctgtggaacctcaataacgacacggaggttcccacagcc
agcatcaccgtggaggggaacccggcactgaaccgggtccgatgggcccactccgggagg
gaggttgctgtgggtgattccgacggacagatcctcatctatgacattggagagcaaatt
gcagtcccccgaaatgacgagtggacacgctttgcccgcacactggctgagatccacgac
aaccgcgaagatgcagaggagctggcggcacagcgcttgcccgcttga
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integrated database retrieval system
