Scleropages formosus (Asian bonytongue): 108920314
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Entry
108920314 CDS
T04919
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
KO
K06483
integrin alpha 4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
sfm04514
Cell adhesion molecules
sfm04672
Intestinal immune network for IgA production
sfm04810
Regulation of actin cytoskeleton
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108920314 (itga4)
04514 Cell adhesion molecules
108920314 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108920314 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108920314 (itga4)
04810 Regulation of actin cytoskeleton
108920314 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108920314 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108920314 (itga4)
04515 Cell adhesion molecules [BR:
sfm04515
]
108920314 (itga4)
04090 CD molecules [BR:
sfm04090
]
108920314 (itga4)
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108920314 (itga4)
Exosomal proteins of other cancer cells
108920314 (itga4)
Cell adhesion molecules [BR:
sfm04515
]
Integrins
Integrin alpha subunits
108920314 (itga4)
CD molecules [BR:
sfm04090
]
Proteins
108920314 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Beta-prop_BBS7
DUF5370
Motif
Other DBs
NCBI-GeneID:
108920314
NCBI-ProteinID:
XP_018584474
LinkDB
All DBs
Position
21:7640451..7662231
Genome browser
AA seq
1049 aa
AA seq
DB search
MPRRSAPEWRARGARGTALVLWWWCLLSGADSYTLDTRHYLTYSGPNASLFGYSVLLHKN
GQESWMLAGAPRAQSTFSQSPANPGAVYKCKVTGEGCEQIYLDVTYCGKTCYPESDNQWL
GVSLSRQKRDGQVLACGHRWKNVHYSRQDQQNKLPNGICYKLEADLIKSRPLIPCYKDHQ
RKFGEDYGSCQAGISNFMTEDLIIMGAPGTSYWTGSVLVYNASSNESSAYLDDSGSVLYG
SYLGYSVGAGHFSKPEATEVVGGAPQHGQTGKVYIFKVETKELQIIFEVMGKKLGSYFGA
SVCVADLNSDGLSDLLVGAPMFSTVREEGRVHVYMNQGAADMKELEFQLVGSDSYAARFG
ETLTNLGDIDNDGFPDVAVGAPQEDDLRGAVYIYNGRKSGISRTYSQRISGSVLGVDLRM
FGQSVSGGIDIDSNGYSDVAVGAFLSDSAVVLRTRPVVIVEASVLLPPSVNRSQPRCNEN
GQPSVCLVVSVCFWVGGKSIPGHIGMLYNLTADVRRREGFPSRFYFTGNGSSNIVMGKIS
ALHNQVKCIDHQAFMKRDVRDIFTPIHFELTYELGKHNVIKTSVKSLPSLKPILQQTGDH
SNLVTNKTQFSRYCAWVNCSTNLQVSAQLVLPQSHKNVPYFALGTGKTIMLNVSLANVGD
DAFLPVLQLRFPSNLYFIKVLEAEEKYVSCETAEDDKTVVGLDCSVGNLYMNSLAKLNIS
FLLDVNQSSSGGDLTITVNATRENVENEDLLHDNFAAVTLPLRYGADLNVHGHVSPTLLM
FGGPEDPDCSMHKFNYTYKVLNAGPSKAIGAKIVIDIPKTLTPYPYRLLSIAALQTSLGH
CYTKDSPDGSDHSCDIPRPNIIQELVFFFSKITKREMYCMKNDSMCLYVECELGDVEVGK
EATIQMEVDVNPAVLQISPGRHGVMLIDSTAVVSLREDPYIVPLQQAPFTKVVLEAQYNQ
RPRKDISMFIIGVSLAVGVLILAVLIYGLWKVGSRDFRLKPMTLHRLHFPQYTTSSHTHN
ATLSLLFEVQIIYQCNVVFGKCKTFVLLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcggagtgcgccggagtggcgcgcgaggggcgcgcggggcacggcgctcgtg
ctctggtggtggtgcctactgagcggcgcggacagctacaccctggacacgcgacattac
ctgacctacagcggtccgaacgcgtctttgttcggatactccgtgctgctccacaagaac
ggccaggaatcctggatgctggccggagcaccgcgggctcagtccaccttcagccagtct
cccgcaaaccctggggctgtttacaagtgtaaagtcacaggggagggctgcgagcagatt
tacctcgacgttacgtactgtggaaaaacatgctatccagaaagtgacaatcagtggctg
ggcgttagtttgtccaggcagaagagggatggacaggtgttggcttgtgggcatcgctgg
aaaaatgtccactattctagacaagatcaacaaaataagttaccaaatggtatttgctac
aagctggaggctgatttgataaaatcaagaccattaattccgtgctacaaagatcatcag
cggaaatttggtgaagactatgggtcctgtcaagctggaatatctaattttatgactgag
gacttaattattatgggagccccggggacttcttactggacaggttctgtgcttgtctat
aatgcatctagcaacgagtcatcagcatatttggatgacagtggcagtgtcctctacgga
agctatctaggttactctgtgggcgccggccacttcagtaaaccggaggccactgaggtt
gtcggaggggcgccccagcatgggcagactggtaaagtctacatatttaaggtggaaacc
aaggagttgcaaattatctttgaggtcatgggtaaaaagttgggatcctattttggtgcc
agcgtctgtgtggcggacctgaactcagatgggctctcagaccttctggtgggggccccc
atgttcagcacagtgcgagaggaagggagggtgcatgtctacatgaaccagggcgctgct
gatatgaaggaattagagtttcagttggtggggagtgactcatatgctgctcgatttgga
gaaaccctcacaaatttgggagacatcgataacgatggctttccagatgtggccgttgga
gcgccgcaagaagatgatctgcgtggagctgtttatatctacaatggccggaagagcggg
atctctagaacctactctcaaagaatctctgggagtgtcttaggagttgacctccggatg
tttggacagtctgtgtcagggggcatagacatagacagcaatggctactcagacgtagca
gtgggggccttcttatctgactcagctgtggtgttgaggacacggccagtggtgattgtg
gaggcctctgtactgctgccccctagtgtgaaccgcagccagccgcgctgcaacgagaat
ggccagcccagtgtctgcttggttgtcagtgtgtgcttctgggtggggggcaaaagcatt
cctgggcacataggaatgctctacaacttaactgcggatgtgagacgcagagaaggcttc
ccctctcggttttacttcactgggaatggctcatccaacattgtgatgggaaagatcagt
gccttgcataatcaggtcaagtgcattgaccaccaggccttcatgaagagggatgtcagg
gatatctttacgccaatccactttgagctcacatatgagctaggaaaacacaatgtcatc
aagacgtccgtgaaaagtctgccctctcttaagcctattcttcagcagacgggtgatcac
agcaacctggtgaccaacaagactcagttttcccgatactgcgcttgggtcaattgctct
acaaacctccaggtttcagcccagctggtgttaccacagtcccacaaaaacgtgccatac
tttgcactgggcactggcaagacaatcatgctcaatgtgtctctggccaatgttggagac
gatgcttttcttccagtgcttcagctgaggtttcccagcaatttatacttcatcaaagtg
ctggaggcggaagagaagtatgtgagttgtgaaactgcagaagatgacaagactgttgtg
ggcctggactgctccgtgggaaacttatatatgaactctttagcaaagctcaacatcagc
ttcctgttagatgtcaaccagagcagcagtggaggtgacctgaccattacagtcaatgca
acacgtgaaaatgttgaaaacgaggaccttctgcacgataactttgcggctgtgacattg
ccgttgagatatggagcagatttaaatgttcatggtcatgtctcaccaacattattaatg
tttggaggtcctgaggaccctgactgctccatgcataagttcaactacacatataaggtt
cttaatgctggtccaagcaaagctataggtgcaaaaatagtgatagatattccaaagact
ttgactccttatccatacagattgctcagcattgctgctctacagacttctcttggacac
tgttacactaaagattcccctgatgggagtgatcacagctgtgacataccaagaccaaat
ataattcaagagctggtatttttcttctcaaaaattacaaaacgggaaatgtattgtatg
aagaacgactccatgtgcctctatgttgagtgtgaacttggagatgtagaagttgggaag
gaagccactattcagatggaggtggatgtgaaccctgctgttctgcagatttccccgggc
agacatggagtcatgctgattgacagcactgctgttgtatcgctgagggaagatccttac
atagtgccccttcaacaggcccccttcactaaggttgtcttagaggcccagtacaaccag
agaccacgcaaagatatatccatgttcatcattggtgtaagtctggcagtaggggtgctc
attctggctgtactcatatatggactctggaaggtgggttctcgagactttcggcttaag
cccatgacgctgcacagactccacttcccacaatacacaactagctcccatacccacaat
gcaaccctcagtttattatttgaagtacaaattatataccagtgcaatgttgtctttggc
aaatgtaagacttttgtgttgctggtataa
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integrated database retrieval system
