Scleropages formosus (Asian bonytongue): 108920541
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Entry
108920541 CDS
T04919
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108920541
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108920541
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108920541
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108920541
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108920541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
108920541
NCBI-ProteinID:
XP_018584858
LinkDB
All DBs
Position
14:8972705..9005625
Genome browser
AA seq
2565 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLPQNQTSSPSSSTENSPVSPPEEQGQGDGPPQP
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSAEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNMHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPLNIAKNLV
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQFAKAEHPEFDPQTVRLGS
RYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMG
DEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDL
ELIGLDYLWRVVIQGSDDIACRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKAS
YDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHI
TLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGEMVDPADD
RKLIGQLNLKDKTLITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCL
PGVIMSLHLRYISFLWQVADLGCSLNMPLLRDGARILMKLMPPDNTTVETLRSICLDHAK
LGDNSLSPTLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLV
LSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTVSPIN
QATHDQALVLQSALQNIPNPSSECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQK
VVWASGCGSVQLVFSSNEEISKIYEKTNAGNEPDGEDEQVCCEALEVMTLCFALIPTALD
TLSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGST
AKERAKHAGDYFTLLRHLLNYAYNSNISLPNAEVLLNNEIDWLKRIKDEVKRTGETGLED
TILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEFP
TEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPVG
PRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQDNES
NVDPRDEVFSYNNQFEDKPSSNKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWK
QFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGCPH
RYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKL
PPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVHPENQVIQN
EPPESESPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNSGDGERNRWYKFDDGDVTECKM
DDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDNELVKYIS
ELTVTTNPHQIKMPAAIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQ
DHLLPEAEEIALISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNVRCWFAH
NVLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPIASPGPSSQQACDN
LSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVA
LDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSARMQSSINGNPPLPNPYGDPNLSQPIM
PLQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSAVLSELLWQVAYSY
TYELRPHLDLLLQILLIEDSWQTHRIHNVLKGIPEDRDGLFDTIQRSKNHYQKRAYQCIK
CMVALFTNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSN
ETSNGYFLERSHSARMTLAKACELCPEEEPDDQEAPDDHDSSPPEDTTLYPHSPGTQYQQ
QNNHPHGQPYTGPAAQHMNNPPRPCQRAQENWEGTEEVAPTQTKE
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacccgtggctctcctgtagggggcaatgacagccagggccaggcgcct
gacgggcagtctcagccccctcttccccagaaccagacatcgtcccccagctcctcaact
gaaaactctccagtgagcccaccagaagaacagggccagggggatggaccccctcaacca
gaggaagaagagcctgcctttccccacacagatttggccaagctggatgacatgatcaac
agaccccgctgggtggttccggtgttaccaaagggtgaattagaggttctccttgaagct
gctatagatctttgtaaaaaaggactggatgtcaagtgtgaagcgtgtcagaggtttttt
cgagatggcttgacgatttccttcacaaaaatactgactgatgaggcagtgagtggctgg
aaatttgagattcataggtgtatcataaacaacactcaccgcctggtggagctgtgtgta
gccaagctctctcaggactggttcccccttctcgagctgctggccatggctctcaacccc
cactgcaaatttcacatctacaacgggacacggccctcagagaccgtgccggcaggggta
cagctggctgaggatgagctctttgcccgcccgcccgaccctcgttcacccaagggctgg
ttagtggatttaataaacaaatttggcacattaaacgggtttcagattctgcacgatcgc
tttatgagtggccaagcactgaatgttcagatcattgcagcactcatcaagcctttcggg
cagtgttatgagttcctaacattgcacacggtgaagaaatacttccttccaattattgaa
atggttccccagtttctggaaaacctcacagatgaggagctgaaaaaggaagctaagaat
gaagccaaaaacgatgcattgtcaatgataatcaaatcgttgaagaacctcgcatcacgg
gtaccagggcaagaggagaccgtgaaaaacttagaaatttttaggttgaagatgattctt
aggttattgcaaatttcttccttcaatggcaaaatgaacgcactaaatgaagtcaataag
gtgatatccagtgtctcctactacactcaccggcatggcagtgctgaggaagaggagtgg
ctcactgctgaacgcatggctgaatggattcagcagaaccacatcctgtccattgtgctc
agagatagtttgcaccagccgcaatatgtagagaagttggagaagatccttcgctttgtc
atcaaggagaaggctcttacacttcaggacttggataacatctgggcagcacaggctggc
aagcatgaagcaattgtgaagaatatgcatgacctcctggccaagctggcatgggatttt
tcgcctgaacagctggatcatctttttgactgtttcaaggcgagttggacaaatgccagc
aaaaagcagcgagaaaagctgcttgagcttatccgtcgccttgctgaagatgacaaagat
ggggtaatggcacacaaggtgctaaacctgctctggaacctggcacacagtgatgatgtt
cctgttgacatcatggaccaggcactgagtgctcacatcaagatcctggattacagctgc
tctcaggaccgagatacacagaagatccaatggatagatcgcttcattgaagagttgcga
acaaatgacaagtgggtgattcctgcactgaagcaaatccgtgaaatttgcagcttattt
ggagaagcgccacagaacctgagaaagaaaatacctttaaacatagcaaagaacttagtg
ggtcagacgcagcgaagcccacatgtgttctacaggcatgacctgatcaaccagcttcag
cacaaccacgcacttgtcacactggtagctgagaacctgtctgcatacatggaaagcatg
aggcagtttgctaaagcagagcacccagagtttgacccccagacagtgcgcctaggcagt
cgctacagccatgtgcaggaagttcaagagagacttaacttcctcaggttcctactgaag
gatggccagctgtggctatgtgcaccacaggccaaacagatctggaagtgcctggctgag
aatgcagtgttcttgtgcgaccgtgaggcctgcttcaagtggtactccaagctgatggga
gatgagccggacctggacccggacatcaacaaggacttctttgagaataatgttctgcag
ctggacccctcactcctcacagagaatggcatgaagtgttttgaacgctttttcaaagca
gtgaactgccgagaggggaagctggtagccaaacggagggcatacatgatggatgaccta
gagctgattgggttggattacctgtggcgggtggtgattcaaggaagtgatgacattgcc
tgtagagcaatagatttattaaaagagatttatacaaaccttggaccaaaactgcaagtc
aatcaggttgagatccatgaagactttatccagtcatgttttgaccgcttgaaagcatca
tatgacacactctgtgtcttggatggggacaaagacagcattaactgtgccagacaagaa
gcaatccgcatggtccgggtgcttactgtcctgagagagtatataaatgaatgtgacagt
gattaccatgaagagagaacaatactgccaatgtcaagagcatttcgtgggaaacacatc
acactcattgtaagattcccaaaccaaggccgacaggtggacgacctggatatctggtcc
cacaccaatgacacaataggttctgtacgacgctgcattttgaatcgaatcaaggccaac
agtgctcacacaaaaatcgagctttttatcggaggagaaatggtggatcctgctgatgac
aggaagctaattggacagctcaatcttaaggacaaaacattaataactgccaagctcacc
caaattagttccaatatgccttcaagtcctgacagctcctccgattcctccactggctcc
cctggaaatcatggaaaccattatagcgatgggcccaaccctgaagtagaaagctgtctg
ccaggagtgattatgtctctacacctccgttacatttcattcttgtggcaagtagcagat
ttggggtgtagtctaaacatgccactgctcagggatggagcccgtatcctcatgaagctc
atgcctccagataacactactgtagagacattgcggtccatctgcctggaccacgccaag
cttggtgataacagcctcagcccaaccctggattcccgtttttttggtccatcgccttct
caagtgctctacctgacagaggtggtgtatgcattgctcatgcccgccagtggtactctt
ggggaagacgccagtgactttcaatacaactttttaaaaagtggtggtttgccacttgtc
ttaagcatgctcaccagaaataacttcctgcccaatgctgacatggagaccaggcgcgga
gcctacctgaatgccctaaagatagccaaattgttattaactgcagttggctttggccat
gtgaaggctgtggcagaagcctgtcagccagtggtggaaggaactgtatcaccaataaat
caggccacccatgaccaggctttggttctccagagtgccctccaaaacatccccaaccca
tcatctgaatgcatgctgcggaacgtagccatccgcttagctcagcagatctctgatgag
aacttcttccaagcttctaagtacatcccagacatctgtgtgatcagagctgtgcagaag
gtggtctgggcatcgggctgtggttcagtgcagcttgtattcagctctaacgaggagatc
agcaagatatatgagaagacaaatgcagggaatgagcctgatggcgaagatgagcaagtc
tgctgtgaagctctggaggtcatgactctttgctttgccctcatccccacggctttggac
acacttagtaaggagaaggcatggcagaccttcatcattgatttgctgttacactgccag
agcaagtctgttcgtcagatggctcaggaacagtttttccttatggcaaccagatgttgt
atgggccataggcccctcttgttcttcatcactctcctcttcacagttttaggtagtact
gcaaaagagagagccaaacatgctggagactatttcaccttgttaagacacttacttaac
tacgcatacaacagcaacatcagcctcccaaatgctgaagttctcctgaacaatgaaatt
gattggctgaaaagaatcaaggatgaagtaaaaagaactggagagaccggactagaggat
accattcttgaaggccatcttggggtcacaaaagaactgcttgctttccagactccagaa
aagaagtactacattggctgtgaaaagggtggtgcaaacctgattaaggagctcatagac
gacttcatcttcccagcatccaatgtgtacttgcagtacatgaagagtggagagttcccc
actgagcaggccataccagtctgcagcaccccagcctctattaatgctggttttgagttg
ctggttgcacttgctgttggctgtgtgcgaaacctcaagcagattgttgataccctgact
gatatgtattacttaggatgtgaagccctcacagagtgggaatacttacccccagtaggc
cctcgaccgaccaaaggctttgtgggtctcaagaatgcgggtgccacgtgctacatgaac
tcggtcattcagcagctctacatgatcccaccgattaggaatggcatcttggccattgaa
ggaacaggcactgatgtggacgatgacatgtctggggatgagaagcaggacaatgagagt
aatgtggatccacgagatgaggtgttcagctataacaaccagtttgaagacaagccttca
tcaaataagtcagaagaccgaaaggagtacaacattggagttttgcgtcacctgcaagtc
atctttggacatttggctgcatccaggttgcaatattatgtacctcggggattttggaag
cagtttcggttatggggagagccagtaaatctaagagagcagcatgatgctcttgaattt
ttcaactccttggtggacagtttggatgaggccctaaaagctctaggtcacccacccatg
ttgagcaaggtccttggtggatcttttgcggatcagaagatttgtcagggttgtcctcac
aggtatgaatgtgaggagtcctttacgacgctgaacgtagatattagaaaccatcaaaat
cttctagattcaatggaacagtatgttaaaggagacttactggaaggtgccaatgcttat
cactgtgaaaaatgcaacaagaaggttgatacagtgaagcgattgcttattaagaagttg
ccgcctgtgctggccatccagttgaaacgctttgactatgactgggaaagggagtgtgca
atcaagttcaatgactactttgagttcccacgggagctggacatggaaccgtacacggtg
gcaggtgtggctaagctggagggtgacgatgtacacccagagaaccaggtgatacaaaat
gaacccccagagagcgagtcaccaggaagctccaagtatcggctagttggcgtactggtg
cacagcggccaggctagtggtggccactactattcgtacatcatccagaggaacagtggt
gatggcgagcgtaaccgctggtacaagtttgacgatggtgatgtcactgagtgcaagatg
gatgatgatgaggagatgaaaaaccagtgctttggtggagagtatatgggtgaggtgttt
gaccatatgatgaagcgtatgtcttaccgccgacagaagaggtggtggaacgcatacatc
ttgttctacgagcggatggactcactggacaaggataatgaactggtgaagtacatctca
gagctgactgttaccaccaatccacatcagatcaagatgccagccgccattgaatgcagc
gtacgcaagcaaaacgttcagtttatgcataaccgtatgcaatacagcctggaatatttc
cagtttattaagaaacttctgacctgtaacagcgtctatttaaacccaccaccagggcaa
gaccatcttttaccagaggcagaagaaattgctctgattagcattcagcttgctgctaga
ttcctttttagcacaggattccacacaaaaaaaatagtccgtggtccagccagtgactgg
tatgatgcactgtgcatcctgcttcgccacagcaagaacgtgcgctgctggtttgcacac
aatgtattgtttgcttacacaaaccggttctcagagtacctgctagagtgccccagcgct
gaggtgcgaggtgccttcgccaagctcatcgtcttcattgctcacttctccttgcaagat
gggccatgcccctcaccaattgcctcaccagggccttcaagtcagcaggcctgtgacaac
ttgagtttgagcgaccacttgttgagagcagtactgaatctactccgaagggaagtgtct
gagcatggacgccacctgcagcagtacttcaacctttttgttatgtacgccaacctgggt
gtggcagagaagacccagctcctaaagctgaacgtgccagccaccttcatgctggttgct
ctggatgaaggccccggaccaccaatcaagtaccagtacgccgagctgggcaagctgtac
actgtggtgtcacagctggtgcgctgttgtgatgtatcagcacgcatgcagtcatcaatt
aatggtaatccacctcttccaaacccttatggagaccctaacctgtctcagccaatcatg
cccttgcagcagctggtggcagaaattttgtttgtccgcaccagctatgtaaagaagatt
attgaggactgcagtaactcagaggagacagtcaagctactgcgcttcagctgttgggag
aacccccagttctcttctgctgtgctcagtgagctgctctggcaggtggcatactcctac
acttatgagctgaggccacacctggacctcttgctacagatcttactcattgaggattcc
tggcagacccacaggatccacaatgtgctgaagggcatcccagaagatagagatggcctc
tttgacacaattcagcgttccaaaaatcactatcagaagagagcctaccagtgtataaaa
tgcatggtggcacttttcacaaattgttctgtggcctaccagattctccagagtaatggt
gacttgaagaggaagtggacatgggcagtggaatggcttggtgatgagttggagcgacga
ccatacactgggaacccccagtacacgtataacaactggtcgccacctgtgcagagcaat
gagacctccaacggatacttcttggagcgttcgcacagtgccaggatgaccctggcaaag
gcctgcgagctgtgtcctgaagaggagcctgatgaccaggaggctcctgatgaccatgac
tcctcacctcctgaggacaccaccttgtacccccactccccagggacacagtatcagcag
cagaacaatcacccacacggacagccgtataccggacctgcagcgcagcacatgaacaac
cccccacggccatgccaacgagcacaagagaactgggaaggcaccgaagaggtggccccc
acgcagacaaaagagtaa
DBGET
integrated database retrieval system
