Scleropages formosus (Asian bonytongue): 108920546
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Entry
108920546 CDS
T04919
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108920546
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108920546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108920546
03110 Chaperones and folding catalysts [BR:
sfm03110
]
108920546
04121 Ubiquitin system [BR:
sfm04121
]
108920546
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108920546
Chaperones and folding catalysts [BR:
sfm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108920546
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108920546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_2
TPR_1
TPR_14
TPR_7
TPR_CcmH_CycH
TPR_8
TPR_16
ARM_TT21_C
ANC1_spectrin
CASP_C
Motif
Other DBs
NCBI-GeneID:
108920546
NCBI-ProteinID:
XP_018584881
LinkDB
All DBs
Position
14:complement(7002732..7020438)
Genome browser
AA seq
2895 aa
AA seq
DB search
MRRSKAEVDCYISSVQSASPSLKDKPVKGFLFAKLYFEAKEYELAKRHVSAYLTVQERDP
KAHKFLGQLYEREGDINKAVGCYKRSVDLNPAQKDLVVKVAELLCSKPEEDSRAELWVEK
AARLLPGTPAVYNLKEKLLSRRGQHGRNQLFDLLQSEFQLRPQDVNVNVKLVQLYCSDGR
LEEAVQHCVAVEKKGTLRDSLEWCSHVVSTLQVYVMQPTISSKKELCRQVHRDLLLAHCN
VLRLTLSDKGVQQGVEALQSFDHAMQSVYKLNTNAEDELTELFSELRGHLYMHAGTLLLK
MAHDKKQQWRAVADLAALCYILAYQVPRPKKKSSKEDQSSQQLVELLACDRQSQSGHMLL
NMSQKCSVLVKEVVEAFGNRSGQESLFKMLFGSQASMNSSFIGNDDIRNIGTQAPEPADL
RKWDNGSILLHEGSLQHLAWLGLQWALLAQSATLRDWLKQLFPRLTLETSKLDTNAPESI
CLLDLEVFLCGVVFTSHTQLLETSMITGSSQLHEPRCLPLPIIKLLSTEKQRTWWDAVYS
LIHKKAPPGMSVKLRMTVQHGLNTLRASEKHGLQPALIIHWAQHLSEMGSAVNSYYDQKE
YVGRSVHYWKVVLPMLEKIKRRKGIPEPLDPIFVHFHSKDIQISAVKGYEEEAVVAFAAH
LDIEGRTEEAIDLLETLTSVSSSWHLARIFQRLSEEAGNGVEETQDRCITYLQNFKKHLK
KIYHANAAEVEKLPVSMEEVKELLNDVNQQIGENEEIEEIDSARSLHSSQLIEPGASVSH
IKFSTPSPTKSVASPSKRHMFSPKTPPQWIEEQRSLLQMLCQQMDSLKKEVHQLRENSSG
STASPHHRLYGEGYATEPLQDPFPAAQGFHGVPLTVATTGPSVYYSQSPAYNSQYLLRTA
ANVTPTKTPVYGINRLPPQQHMYAYQQPTHTPPLQATPACIYPQEQVYGAPLRFESPATS
LLSPYSEEYYSHTVPQSATNPTLPEPGYFTKPSIVPVQPAKSSEQSAIDFGKIDFGQQIP
VEPSKVPSFGTGAVAQSTPAAFKFNSNFKSNDGDFTFSSPQVKNNSESLLGLLTSDIPTR
TEVPLGQKTSAQDQTPAQPGFFNFGSKNIPCFPFSDMTQSQNKPSIFGKTNRTFSFADVT
KPTSSMGSKNVHAEKNAESDSESNHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCN
RAKLFRFDTETKEWKERGIGSIKILRHRTSGKVRLLMRREQVLKICANHYITADMVLKPN
AGSDKSWVWYAIDYADEMPKHEQLAIRFKTADEAALFKTKFEEAQAALTNSPQEQGQQTE
KELPYKSTVSKAASKDVGFGAQFAKKEGEWDCDVCSVRNGPTVDKCLSCQSPNPSAGSKA
FASATTGENLTLSLGKETRKDTDIGSSASTFGSFAQVPASFNFGTTDTMSTPVGFGDMFS
KKKGEWDCDTCLVRNNAAAIKCLSCQAPNKNPMPSQGDLAAVFGKKNGQWDCDSCLTRND
GSSSACVSCHTPNPSAKSTGSAAPSVSAFSFSFGSKNTSQQSAGTGFKTTFSSTFKFGQS
DDKVSPASFKFGAPAQGDVKTSGGGFSFSMPAGGLKFGIQDPVKQAVPAESQPGVEGSAS
QFLKNIAEQHREKEKESVTGIGNVASISMPSLDKAEHLENPLISGKLNLFSFADLAKSSS
GDFQFGQKDPDFKGFSGAGEQLFSSFQADKKADTSAEQDEGMYRTEENDDIQFEPVVQMP
DKVDLITGEEDEEPLYCQRLKLFRFDPVTSQWKERGVGNLKFLKNSKNGRLRVLMRREQV
LKVCANHWITTTMNLKPLSGSDKAWMWLANDFSDGEAKLEQLAAKFKTAELAEEFKHKFE
ECQRLLLDIPLQTPHKLVDSGRTAQLIQKAEEMKSGLKDLKSFLSDDKTKVKDEENQIST
SANTFDMIVKPKADITGPALEWDNYDLREDALDDSTQTSVYAFPLASSPVQSNLFRFGES
TAGFSFSFQPILSPSKSPAKLNQSRASVGTDEESEVTQDEERDVQYFEPVVPLPDLVETA
TGEENEQVVFSHRAKLYRYDKNLNQWKERGIGELKILQDYNTKRVRLVMRRDQVLKLCAN
HWITPNMKLEAMTGAERAWIWSAMDFAEPEGKVEQLAVRFKLQEVANTFKEIFDKAKNAQ
ENEDLVTPVSPREAPCDSKCGEAAIAVLVETTRERTELSPQSNQTPDITSSAAKIVSPPK
FVFGSDSVQKIFGTSPSSKEIIPATKMDTKATISSSSSKTDVGPINQIPTATPSQIPAFK
VPERAISQVVKEKQKEAPVDAAKVAAESQDSDEVQIVFVREPTTEQRELAQELMLPLTFF
CYQSEAGDSSDDQEDDEDFETAVRKLNGKLYPDAVQGGANGQRMSMEPQVEERDPECIVI
WEKKPTPEEEEKARSLQLPPTFFCGIGNDNEPEKDKGEDFETEVKKVQEEMKNDAVCSEN
TLSSDAIPARACTTAVKVLESQPDSSSDTAPVLSPIDLSTRKDNEPDSSTSASSASFGFH
SMTGFSFADLAKNSSEFAFGENDANFSWANAGAAVFGEAAVSQNEVEEGSDDEETTNNAD
IHFEPIVSLPEVETKSGEEDEEILFKERTKLYRWDRDLGQWKERGVGDIKILYHPMRRYY
RVLMRRDQVLKVCANHIITKAIELKPMNTSANALVWTATDHAEGDAKIEQLAAKFKTAEL
AECFKKKFEECQSRMSQAQSSQLSRVQELCEEGNPMVYFDITVDGHLLGRITMVLFSHIV
PKTAENFRALCTGEQGLSFLNCIFHRVIPEFMCQGGDITKQDGTGGRSIYGDKFEDENFD
VRHTGPGILSMANWGRDTNNSQFFITLKTAEHLDFKHVAFGFVKDGMDIVYQMGELGTAS
GKPSKTIIISNCGQC
NT seq
8688 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaagcaaggcggaggtggactgttatatttcatcagtacaaagtgcttctcct
tcgctgaaagataaaccagttaaaggattcttgtttgctaaattgtactttgaagcaaag
gagtacgaacttgctaaaaggcatgtgtcagcctacttgacagtacaagaaagagatccc
aaagcacacaagtttctgggccagctgtatgaaagagagggagacattaataaagcagta
ggatgctacaagcgatctgtagacctgaacccggctcagaaagacctggtagtgaaggtg
gcagagttgctgtgcagtaagcccgaagaggacagccgggcagagttatgggtagagaag
gcagctaggctcctgcctggaacccctgcagtatacaacctgaaggagaaactgctcagc
agacggggtcaacatggcaggaaccagctgtttgaccttctacagtcggagttccagctg
cgccctcaggatgttaatgtaaatgtcaagctggtacagctgtactgctccgatgggcgg
ctggaggaagcagtacagcattgtgtggcagttgagaagaaaggcaccctacgtgacagc
ctggaatggtgttctcatgttgtgtccactcttcaggtgtatgtgatgcagcccaccata
tcatccaagaaggagctttgtcgtcaggttcaccgggacctgctgttggcacactgcaat
gtgctgaggctcactctctcagacaagggtgtgcagcagggcgtggaggccctgcagagt
tttgaccatgctatgcagtcagtgtataagctcaacacgaatgctgaagatgagctcaca
gagttgttctcagagctgcggggtcatctttacatgcatgctgggacactgctgctgaag
atggcccatgacaaaaagcagcaatggagggcagtggccgacttggctgcactctgttat
attttggcttaccaggtccctagaccaaagaaaaagtcctctaaagaggaccagtcttca
caacagctggtagagctcctggcctgcgatcgccaaagtcaatctggacacatgctcctg
aatatgagccagaagtgcagcgtccttgtgaaggaggtggtggaagcattcgggaaccgg
agtggacaggaaagtctgttcaaaatgctttttggcagccaagcatccatgaactcctcc
tttattggcaacgatgacatccgcaacattggcacgcaggcgcctgaacctgcagacctc
aggaaatgggacaatggttccattcttcttcacgagggcagcctgcagcacttggcctgg
ctgggcttgcagtgggcacttttggcccagagtgctaccctcagggactggctgaaacag
ctcttcccacgcctcactcttgaaacgtccaagttggacactaatgccccagagtccatt
tgcttacttgaccttgaggttttcctatgtggcgttgtgttcaccagtcacacgcagctg
ttggagacatctatgatcacaggcagttcccagctccatgagcctcgctgtttgcccctg
ccaattataaagctgctgtccacagaaaagcagaggacctggtgggatgcagtctacagt
ctcatccataagaaagccccgccagggatgtctgtgaaacttcggatgaccgtccagcat
ggtttgaacaccctgagagccagcgagaaacacggcctgcagcctgctttgattatacac
tgggcacagcaccttagtgaaatgggtagtgctgtaaactcctattacgaccagaaggag
tatgtcggccgcagtgtacattactggaaagttgtgctgccaatgctggagaaaattaag
aggcgcaagggcattcctgagcctcttgaccccatttttgtacattttcatagtaaagat
atccagatttctgcagtgaaaggatatgaagaagaggcagttgttgcttttgcagcacat
cttgatattgaaggcagaacagaggaggcgattgatctgcttgagacccttaccagtgtt
tcatctagctggcatcttgcacggatatttcaaagactttctgaagaagcaggaaatggg
gtggaagaaactcaagacaggtgcattacgtatctgcagaattttaaaaagcacctgaaa
aaaatctaccatgccaacgcagcggaagtggagaagctgcctgtgtcgatggaggaagta
aaggagctcttaaatgatgttaaccagcaaataggggaaaatgaggaaattgaggagatt
gacagtgctcggagcctacattctagccagctcattgaaccaggtgcctcagtgtctcac
ataaagttctccaccccatccccaactaagagtgtggcatcaccttctaaaagacacatg
ttctctcctaagacaccaccccaatggattgaggagcaaaggtctcttctgcaaatgttg
tgtcagcaaatggactccctcaagaaagaggtccatcagttgagggaaaactcctcaggg
tccacagcatcccctcatcacaggctgtatggagagggttatgctactgaacctcttcag
gatccatttccagcagcacagggtttccatggtgtacctcttacagtggccacaactggt
ccttctgtttactatagccaatcccctgcatataactcgcagtatcttcttcgtacagct
gctaatgtcacaccaacaaagactccagtgtatggcatcaaccgtctaccccctcaacag
cacatgtatgcctaccaacagcctacgcacacaccacctctgcaagcaacaccagcttgc
atttatccccaagagcaggtctatggagctcctttgcgctttgagtctcctgcaacaagc
ctactctccccatacagtgaagagtactacagccacactgttcctcagtctgccactaat
cccactctgcctgagcctggctacttcaccaaaccatcaattgtccctgtccagccagca
aaaagtagtgagcagagtgctattgattttgggaagattgactttggtcaacaaatacct
gttgaaccatccaaggtgccgagctttggaacaggggctgttgcacagtccactcctgct
gcattcaagttcaactcaaatttcaagtcaaatgatggggatttcaccttctcatcccct
caagtaaaaaacaatagtgagagcttgttgggtcttttgacatctgatattccaacaaga
actgaagtacctttgggacaaaagacatcagcccaagaccaaacaccagcccagccaggg
ttctttaattttggcagtaaaaatatcccctgctttccatttagtgacatgacccaaagc
cagaataagcctagcatttttgggaaaacaaatcgcacgttcagttttgcagacgtgacc
aaacctacatctagtatgggaagcaagaatgtgcatgcagaaaaaaatgctgaaagtgac
agtgaaagcaatcatgttgaggaggatgaagatggccctcacttcgagcccattgtccct
ctgcctgataaagtggatgtaaaaacaggagaagaagaggaggaggagatgttttgcaac
agggccaagctctttcgttttgacactgaaactaaagagtggaaggaaagaggcattggc
agcatcaaaatcctgaggcaccgaacatcaggcaaagttcgcttgctgatgagacgggag
caagtattgaaaatttgtgccaatcactatatcactgccgatatggtcctgaaacctaat
gctggttctgacaaatcctgggtttggtatgctattgattatgcagatgaaatgccaaag
catgaacagctggccatccgctttaaaactgcagatgaggcagccctttttaaaaccaag
ttcgaggaggcccaggctgccctgactaattctccccaagaacaaggccaacaaacagaa
aaagaacttccttacaaatccactgtttctaaagcagcaagtaaagatgttgggtttgga
gcccagtttgcaaagaaagaaggggaatgggactgtgatgtttgtagtgtgagaaatggt
cctacagttgacaagtgtctttcctgccagagtccgaacccaagtgcaggatcaaaagct
tttgcttcagccacaactggggaaaatttgaccttgagcttagggaaggaaaccagaaaa
gacacagacattgggtctagtgcatctacatttgggtcatttgcacaggtgcctgcctct
tttaactttggaacaactgataccatgtctacccctgtgggttttggtgatatgttttct
aaaaagaaaggtgaatgggactgtgatacctgcttagttagaaataatgcagcagcaata
aagtgcctttcctgccaggctccaaacaagaacccgatgccttctcagggtgatttggca
gctgtgtttggaaagaagaatggacagtgggattgtgattcctgtttaactagaaacgat
ggctcctcgagtgcctgtgtctcttgccacacacccaatcccagtgcaaaaagcacaggt
tctgctgcaccatcagtctctgccttcagtttcagcttcggtagtaaaaatacttctcaa
cagtctgcaggtacaggatttaagaccacttttagcagtacctttaaatttggccaaagt
gatgacaaagtatctccagcatcgtttaagtttggggctcctgctcagggggatgttaaa
acttctggtgggggcttttccttctcaatgcctgctggtggccttaagtttggaattcaa
gaccctgtgaaacaagctgttccagctgagagtcaaccaggtgttgaaggatcagcatcc
cagttcctgaaaaatattgctgaacaacacagagagaaagaaaaagagtctgtcacaggc
attggaaatgttgcatctatatctatgccatctctagataaggctgagcatctggaaaat
cctctaatttctgggaagcttaacttgttcagttttgcagatttggcaaaatcctcatct
ggtgactttcagtttggacagaaggaccctgatttcaaaggcttttctggtgctggggag
cagctcttctcctcatttcaggctgacaagaaggcagacacctctgcagaacaggatgaa
ggcatgtacagaacagaggagaatgatgatatccagtttgaacctgtggttcagatgcct
gacaaagtggacctcattactggggaagaagatgaggaaccactttattgtcaacgtctc
aagcttttcaggtttgatcctgttaccagccagtggaaagaacgcggagtgggaaatctt
aagttcctgaaaaacagtaaaaatggaagactaagagtactcatgagacgggaacaagta
ctgaaggtatgtgctaaccattggatcactacaactatgaacctgaagcccctttctggg
tcagataaggcctggatgtggctagccaatgacttctcagacggtgaggctaagctagag
caacttgcagcaaagtttaaaacagcagagctggcagaggaattcaagcacaagtttgaa
gagtgtcaaagattgctcttagacatacccttgcagactcctcacaaacttgttgactct
gggagaacagcacagctcattcaaaaagcagaggagatgaaatctggcctgaaagatctt
aaatccttcctatctgatgacaaaacaaaagtcaaagatgaagaaaatcaaatcagtaca
tctgctaatacttttgacatgattgttaaacccaaagctgacattaccgggcctgctttg
gagtgggataactatgacttgcgagaagatgccctcgatgacagtacacagacttcggtg
tatgcttttccgttagcaagcagtccagttcagtcaaatttgttccgttttggagaatca
actgctggcttcagcttcagtttccagcccattcttagtccatccaaatctccagctaaa
ctaaaccagagtagagcttctgttggcactgatgaggaatcagaagtaactcaggatgaa
gaaagagatgtacagtattttgagcctgtggttcctttgcctgatcttgtggaaaccgca
actggtgaggaaaatgagcaagtggtgtttagtcacagagctaaactgtaccgctatgat
aaaaatctgaatcagtggaaagagagaggcataggtgaacttaaaatcttgcaggattat
aacactaaacgtgttagacttgtcatgaggcgtgatcaggtgttgaaactttgtgccaac
cactggattaccccaaatatgaagttggaagccatgactggggctgagagggcgtggatt
tggagtgccatggattttgcagaacctgaagggaaagtggagcaactggctgtccgtttc
aaactgcaagaggtagcaaacacatttaaagagatctttgacaaggctaagaatgcccaa
gaaaatgaggatctggttactcctgtctcgcctagagaggcaccatgtgactcaaaatgc
ggtgaagctgcaattgcagttcttgtggagaccaccagagaaaggactgaattgagtcct
cagagcaaccagaccccagatattacaagttctgctgcaaaaatagtttccccacccaaa
tttgtttttggctcggattctgttcaaaaaatctttggaacctctccctcttccaaagag
attatacccgccacaaaaatggataccaaggccaccatatcctcctcaagctctaagact
gatgttggccccattaaccaaattcctactgcaacaccttcacaaattcctgcatttaaa
gtccctgaaagagctatcagtcaggttgtgaaagaaaaacaaaaagaagcaccagtagat
gctgcaaaggtggcggcagagtcgcaggactcagatgaggttcagattgtattcgtacgg
gaacctaccactgagcagagagaactggcccaggaactcatgctgcccctcaccttcttc
tgttatcaaagcgaggctggcgacagcagtgatgaccaggaggatgatgaagactttgaa
actgctgtacggaagcttaatggtaaattgtatcctgatgcagtacagggaggagctaat
ggccagaggatgtcaatggaacctcaagttgaggagagggatccagagtgcatagtgatt
tgggagaaaaaaccaacccctgaagaggaggagaaggccaggagcctccagcttcctccc
accttcttctgtggaatcggcaacgacaatgagcccgagaaagacaagggggaagacttt
gaaacggaagtcaaaaaagtacaagaagagatgaagaatgatgctgtgtgctcagaaaat
acactttccagcgacgctatcccagccagggcctgcaccacagcagttaaagtacttgag
tctcagccggactcttccagtgatactgcccctgtcctcagtcccatcgatctatccaca
agaaaggacaatgagccggactcgagcacctcagcatcatcggcatcctttgggtttcat
tccatgactggattttcatttgcagacctggctaagaattcttctgaatttgcttttggg
gaaaacgatgcaaacttctcttgggcgaatgctggagctgctgtatttggagaagctgca
gtatctcaaaatgaagtagaagagggtagcgatgatgaagaaaccacaaacaatgcggat
attcattttgaacctattgtgtctttaccagaggtagagactaagtctggtgaggaagac
gaagagatccttttcaaagagcggaccaagctgtaccgttgggatagggacttgggccag
tggaaggagcgtggtgtgggagacataaagattctgtaccaccccatgaggaggtactac
cgggtgctaatgaggcgggatcaggtattgaaagtgtgtgccaaccacataatcaccaag
gccattgaactcaagcccatgaacacctcagccaatgccttggtctggactgccacagac
catgcagagggagatgcaaagatcgagcagctggctgccaagttcaagacagctgagcta
gcagagtgtttcaagaagaagtttgaggagtgtcaaagccgcatgtcccaggcgcagtcc
tcccagctgtcccgtgtccaggagctgtgcgaagaaggaaatcccatggtgtactttgac
atcactgtagatggacatctgttgggtcggatcaccatggtgctcttctcacacattgtc
cctaaaactgccgagaacttccgagccctgtgcactggagagcagggcctcagtttcctc
aactgcatttttcacagggtcattcctgagttcatgtgccagggtggagatatcaccaaa
caggatggcactgggggaagatccatttatggagacaagtttgaggatgagaactttgac
gtgagacacacaggaccaggcatcctctccatggcgaactggggtcgagacactaataat
tcccagttcttcatcactctgaagacagcagagcatttagacttcaaacacgttgccttt
ggctttgtcaaagacggcatggacatagtgtatcagatgggggaacttggcacagcaagt
gggaaaccaagtaaaaccataattatttctaactgtggacagtgctag
DBGET
integrated database retrieval system
