Scleropages formosus (Asian bonytongue): 108920550
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Entry
108920550 CDS
T04919
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108920550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108920550
03041 Spliceosome [BR:
sfm03041
]
108920550
03036 Chromosome and associated proteins [BR:
sfm03036
]
108920550
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108920550
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108920550
mRNA cycle factors
Common to processing body (P body) and stress granule
108920550
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108920550
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108920550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
108920550
NCBI-ProteinID:
XP_018584886
LinkDB
All DBs
Position
14:9011976..9020544
Genome browser
AA seq
693 aa
AA seq
DB search
MSHVVVENAHGLDKQLAALDLNSAGDGQGGGGTGRRYIPPHLRNKEASRSDSAGWDGGRC
NGFVNGYHDGRDNRLNGDRSGFGGRGPSRSDRGGSGGYRGNRGFGYDKDGGWNSSKDRDA
YSSFGGRSDRGKSSFFGDRGAASRGRYERGGFGGGSGRWAEDSRDEEDWSKPTSPNERLE
HELFSGSNTGINFEKYDDIPVEATGTNSPPHIESFHDVDMGEIIMGNITLSRYSRPTPVQ
KHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTEGPGKALQAVKASSQENGKYGRR
KQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLEKGCHLLVAT
PGRLVDMMERGKIGLDCCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSA
TFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSL
TLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAAR
GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDLLVEA
KQEVPSWLESLAYESHHKGGSRGRSKSRFSGGFGGRDYRQSSSSSNSFSSRGGRSTGGHG
GSRGFGGGKGGFGNFYNSDGYGGSYSQVDWWGN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgaaaatgcacacggtctagataagcagcttgctgccctagac
ttgaactccgctggagacggacaaggtggcggaggaacggggaggcgttacattcctcct
catctgcggaacaaagaagcttccaggagtgattctgctgggtgggatggtggacgctgc
aatggctttgtaaatggctaccatgatggcagggacaaccgattgaatggtgatcgaagt
ggttttggaggacgtggaccatctcgctcagacagaggtgggagcggcgggtaccgtggc
aacagaggatttggttatgacaaagatggtggatggaattcttccaaagacagagatgct
tattccagctttggaggacgcagtgatagaggaaaatcttcattctttggtgacagagga
gctgcatctcgaggaaggtatgaacgtggaggctttggtggaggcagtggccgctgggca
gaggactcaagggatgaggaggactggtccaaacccacttctccaaatgagcgccttgag
catgagctcttctctggaagtaacacaggaattaactttgagaaatacgatgacattcct
gtggaggccaccggcactaattcccctccccacattgaaagcttccatgatgttgacatg
ggagagatcatcatgggcaatattactctgagccgctatagccgacccactccagttcag
aagcatgcaattccaatcatcaagtccaagagggacctgatggcttgtgcacagacaggt
tctggaaaaacagcagcgtttttacttccagtgctgagtcagatttacactgagggtcca
ggcaaggccttgcaggcagtcaaagccagcagccaggaaaatggaaagtatggacgtcgt
aagcagtatccaatctctttggtactggcacctacaagagagcttgctctccagatctat
gatgaggcaagaaagtttgcctaccgatccagagtgcgcccttgcgttgtgtatgggggg
gctgacattgggcagcagatccgggacttggagaaaggctgtcaccttctggtggctaca
cctggacgtctggtggacatgatggaaaggggaaaaattggtctggattgctgcaactac
ctggttctggatgaggcagaccgcatgcttgacatgggctttgagccccagatccgccgt
attgttgagcaggataccatgccaccaaaaggcctccgtcagacaatgatgttcagtgct
accttccccaaggaaattcagattcttgcccgtgactttttggatgagtacattttcttg
gctgtgggtcgtgtcggttcaacttctgagaacatcacccagaaggtggtctgggttgaa
gaaaatgacaagcgatccttcttgctagatctgctgaatgcaacaggcaaggattccctc
accctggtgtttgtggaaactaagaagggtgctgacgcccttgaggacttcctgtaccgt
gagggctatgcctgtaccagtatccatggggaccgttcacagagagaccgggaagaggca
cttcatcagttccgttctgggaggtgcccgatcctggttgctacggcggttgctgctcgt
ggacttgacatctcaaatgttaagcatgtcatcaactttgacttgcctagtgacattgaa
gaatatgtccaccgtattggacgcactgggcgtgttggaaaccttggcttggctacatca
ttcttcaatgacaagaatagcaacatcaccaaagatctcctggacctccttgtggaagct
aagcaggaggttccttcttggctggagagcctggcatatgagagccaccacaagggtggc
agccggggtcgctctaagagcaggttctctggtggctttggtggtcgggattaccgccaa
agcagcagcagcagcaacagctttagtagccgtggaggccgcagcactgggggccatggg
ggaagcagagggtttggtggtggtaagggtggctttgggaacttctacaacagtgatggt
tatgggggaagttattcccaggttgactggtggggaaactaa
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