Scleropages formosus (Asian bonytongue): 108920754
Help
Entry
108920754 CDS
T04919
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108920754 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108920754 (dcp1b)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108920754 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
108920754 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
108920754
NCBI-ProteinID:
XP_018585285
LinkDB
All DBs
Position
21:19518960..19530149
Genome browser
AA seq
543 aa
AA seq
DB search
MTASTSGTGPALLAKGLDISLAALQRQDPYINNIVDVASQVALYTFSNKANEWEKTDVEG
TLFVYTRLASPRHGFTIMNRLSMDNQTEPITKELDFQLQDPFLLYRNARLSIYGIWFYDK
EDCQRIAELMKNLTRQEQHLAQQGGQTPPGAVPASDGKAVDILQMLTKARDEYDKAKPGS
EPKEIASGSMIHDNPNLIKPIPVKPLERQAPVHQQPHQDSDMKPKQLSLAALFGSQSGSD
LLSSQTGLGVKGSGGRPSVARSLSYEESAQQGGMNPAPAALPEPCLAIQKLMVAPPGRVG
GDLLQPVSESPENRLSENDGAPQAHQCHSRNPLQRLFPDSTTTCCSHPVTLPVPGPTPAT
SQPPPLLPSLRPAQPDLTQSDLAQPVFFSPGKPSQVSPQELLQRLQLVQQEQNLSTDPPR
PALAPRFQELPTWPDKAPTSGLHRSNLLFQVISPQRIPATVAPSLLLSPMVFTQTKSTKG
GPETCFPSASLLTPRVTEEQRVLTRSQLQATLLHLIQNDAAFLDTIYEAYVSSITKDSTA
KNF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccagcacgagcggcactggccccgcgctcctggctaaaggcctggacatcagc
ctggccgctttgcagagacaagacccctacatcaacaacatcgtagacgtggccagtcag
gtggcgctctacaccttcagtaataaagcaaatgagtgggagaagacagatgtggaagga
accctctttgtgtacaccagactggcctcacccagacatggttttaccattatgaatcgt
ctgagcatggacaaccaaacagaaccaatcacgaaggaactagattttcagctgcaagac
ccctttctgctctacaggaatgcccgattgtctatctacggaatctggttctatgacaag
gaggactgccagcgcatagcagagctcatgaagaatctgacgaggcaggaacagcacctc
gcccagcagggtggacaaacacctccaggagctgttccagccagcgatggcaaagcagtc
gatattctacagatgctgactaaagcccgtgatgagtatgacaaggctaagcctggctca
gagccaaaggaaatagccagtgggagtatgatccatgacaaccctaacctgatcaagccc
atccctgtcaaacccctggaaaggcaagcacctgttcaccagcagccccatcaggacagt
gacatgaagcccaagcagctctccttagcagctctttttggtagccagtctggatcggat
ctcctttcctctcagacaggtttgggagtcaaagggagtggaggacgaccttcagtggcc
cgctccctgtcatatgaggagtctgcccagcagggcgggatgaacccagcacctgctgcc
ctcccagagccttgcttggcaatccagaagctgatggtggcccctcctgggcgggttggg
ggagacttgctacagcctgtgtctgagtctcccgagaaccgcctgagtgagaatgacggg
gcaccacaggcccaccagtgtcatagcagaaacccgctccagagactattcccagactcc
accaccacctgttgttcccatcctgtaacacttcctgtacctggacccacccctgctact
tctcagcctcctcctctcctgcccagcctccggccagcccagcctgacctaacccagtct
gacctggcacagccagtgttcttcagtcctggcaagccgtcccaggtttccccccaagag
cttctccagcggctgcagttggtgcagcaggagcagaacctgagtacagacccccctcgg
cctgctcttgcaccacgcttccaggagctacccacctggcctgacaaggctcccacctct
ggacttcacagatcaaacttgctgtttcaggtgatctccccccagcgcattcctgccact
gttgctcctagcctgctgctctcacccatggtattcacgcagaccaagtcaaccaagggg
gggccagaaacatgcttcccttcagcttccttactcactccaagggtcacagaagagcag
agggttctaaccagaagccagctccaggccacgctcctgcatctcatacagaatgatgct
gccttcctggataccatctacgaagcgtacgtgtcctccatcaccaaagacagcacagca
aaaaacttctaa
DBGET
integrated database retrieval system
