Scleropages formosus (Asian bonytongue): 108920837
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Entry
108920837 CDS
T04919
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108920837
09122 Translation
03013 Nucleocytoplasmic transport
108920837
03015 mRNA surveillance pathway
108920837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108920837
03041 Spliceosome [BR:
sfm03041
]
108920837
03009 Ribosome biogenesis [BR:
sfm03009
]
108920837
03012 Translation factors [BR:
sfm03012
]
108920837
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108920837
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108920837
mRNA cycle factors
Stress granule specific factors
108920837
Spliceosome [BR:
sfm03041
]
Complex C
Other components
EJC/TREX
108920837
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
Helicases
108920837
Translation factors [BR:
sfm03012
]
Eukaryotic type
Initiation factors
eIF-4
108920837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108920837
NCBI-ProteinID:
XP_018585400
UniProt:
A0A8C9R5W7
LinkDB
All DBs
Position
21:complement(22823626..22828769)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAAVPVKKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAVQIQKV
LLALGDFMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcggtgcccgtgaagaagcgtctcctgaaggacgaagacatgaccaaa
gtggagtttgaaacgagcgaggaggtggacgtgacgcccacgttcgacacgatggggctg
cgcgaggacctgctgcgtgggatttacgcgtacggctttgagaaaccatctgcaattcag
caaagagccattaaacagatcatcaagggcagagatgtgatcgcacagtctcagtctggc
acagggaagactgccaccttctgtgtctcagtgctccagtgcttggacatccaggttcga
gaaacccaagcacttattttggcaccaacaagagaactggccgtgcaaattcaaaaggtt
cttctcgctttgggtgacttcatgaatgtccagtgccatgcctgcattggagggacaaat
gtaggagaggatatcaggaagctggattatggtcagcacgttgtggccggtacgccaggc
cgtgtgtttgacatgatccgtaggcggagtctgaggacccgggctatcaagatgcttgtc
ctggatgaggcagatgaaatgttgaacaaaggttttaaggagcagatctacgatgtgtac
aggtacctgcctcctgctacacaggtggttctcatcagcgctaccctgccccacgagatc
ctggagatgaccaacaagttcatgacagaccctatccgcatcctggtgaaacgtgacgag
ttgacgctggagggcatcaaacagttctttgttgctgtggagagggaggaatggaagttc
gacacactgtgtgacctgtacgacacactcaccatcacacaggctgtcatcttctgtaac
accaagaggaaggtggattggctgactgagaagatgagggaggccaacttcactgtgtcc
tccatgcatggagacatgccccagaaggagagggagtccatcatgaaggagttcagatct
ggagccagccgcgtgctcatctccacagatgtgtgggccagaggcctggatgttccacag
gtgtccctcatcatcaactatgacctgcccaataaccgagagctgtacattcacagaatt
ggccggtccggtcggtatggccgcaagggtgttgccatcaactttgtaaaaaacgatgac
atccgcatccttcgtgacattgaacaatactactcaacacaaattgatgaaatgccgatg
aatgtggctgacctcatctaa
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