Scleropages formosus (Asian bonytongue): 108921197
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Entry
108921197 CDS
T04919
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108921197
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108921197
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
108921197
NCBI-ProteinID:
XP_029106939
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All DBs
Position
4:complement(25322266..25334578)
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AA seq
1343 aa
AA seq
DB search
MAPLKIKHIVSFTSQDPKYCVKNLCSEGEAPKPWLCSPHDHSGLLKAELQMERAVIIGYI
DVGNYGSAFIQIDVGRSSWSLEEPFVTLLPTATLMSPADSRQGAGRTGVRMFKKVDFMSA
AAECPWDRVRITCTQPFNRRTQFGLSFLRIRSPQDEPEGGVEEQVESTICQKTPEQMTLK
VKEWLSSPGVQRTFFGRMSGESPPETGSEGALLRGPCGAKAGLSRTARLVAVAKSTRRLF
PQSPVAQKIRGSITDGEACASHSASGKQTGKHLKRKPKPARLTCADSTSSSKRTKSVASQ
VSRPNHSSPSRTPPSSQSGCLDSGDPETTCPICGEYFTSEYLPLHASSCEGEAEWLVPER
TMETDFSRPHSSTPGPNIRSSTSPTDDLVSCPLCSCRFPLSQIQQHASNCEDCIKTCFSL
NGLSNLIIDALGNDDSVVLKTVRSPDLRTQQINMQNLTPDQWREIINKKMRFPQELIGAI
QEGNATLVADLLKTGDGIIRQLDDSEDRLWREALNLAIRLGSEDIMDTLLGGVKFDFRQI
HEALLVAVDTNQPRVVKKLLDRLDKEKGVGNNKVDVRSFSLAIFDHSIDDSQFAPGVTPL
TLACQKDLYEIVTMLTNKGHVIPRPHRISCACLECRNGRQYDLLKFSLSRINTYRGIASR
AYLSITSEDAMLSAFRLSRELHKLSKKEPEFKPQYLCLEELCQEFAVELLGMCRNQSEVT
TILNDCDNDSEDEDDGLDGRAFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSSIWCGN
LSGWKGSRTAWKLLVSIGIFITMPFLCIIYWIAPKSKIGKMLKIPVIKFLLHSATYLWFL
ITLLAESIAMEMYRTEFASRHQNLLHNSLHMVWVAGFFWFECKEVWIEGLRSYFLDWWNC
LDMIVLSMYLASFVLRGLIMLKGYFVCQVPERADECAYFTQADREHWRQEDPQLIAELLF
AVTSMLSFTRLAYILPAQESLGTMQISIGKMIDDMMRFMFILMIIGTAFLCGINNIYVPY
VVSTHLGQFNETFRFLFWTMFGVVSQDYVDMPDFVVAEFVGRVLYGIFTLIIVIVLLNML
IAMITNSFQKIEDDADVEWKFARSKLYLNYFREGLTMPVPFNIIPSPKAAFYLMRGIFRR
ICCCCNCNSTPDYPPIASISNGMQSDGENRVPYRQQVIRALVQRYIESARREFEESKRKD
VGNRITELNKMVRRLHSEMKQIHQTVLHSSQGSSNCSCSEDSSVLGKYILGAKNNFRGFS
SGTYSPLKVTVHEEEKAEAEAQKDAQEVTKTEVKEQNLPEGCENRASSPTGSKGSWDTGF
GSQEAEESSEATADTQASENSAD
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggctccgctaaagattaaacacattgtttcgttcacgtctcaggatccaaaatactgc
gtgaagaacctgtgctcggagggagaggcccccaagccatggctgtgtagcccccatgac
cacagcggtcttctcaaggcagaacttcagatggagcgtgcagtcattattgggtacatc
gatgttggtaactacgggtctgcgttcattcagattgacgtggggcgctcctcttggtct
ctcgaggagcctttcgtcacactgttgcccacagcgaccctgatgagtccagcagattcg
aggcagggcgcagggcgtacaggtgtgcgaatgttcaaaaaagttgacttcatgtctgct
gcagcagagtgtccctgggacagagtgcgcatcacttgtacgcagcccttcaacaggcgc
actcagtttggtctgtccttcctccgcatccgcagccctcaggatgagcctgagggaggg
gttgaggagcaagtggagtccaccatttgtcagaaaacaccagagcagatgacgctgaaa
gtaaaagaatggctgtccagtccaggtgtccagcgaaccttttttgggcggatgtcaggg
gaatctcccccggagacaggttccgagggcgcgttgttacggggaccttgtggagccaag
gcaggcctgagcagaacagctcgcttggttgcagtggccaagtccaccaggcgcttattt
ccccagtcccctgtcgcacagaaaatccgaggcagcatcacagacggagaggcttgtgct
tcccacagtgctagtgggaaacagactggcaaacacctgaaacggaagccaaagcctgct
aggctgacttgtgctgacagcacctcctcctctaagaggaccaaatctgtggcttctcag
gtttctcgccctaatcactccagtcccagcagaacccctcctagctcacagtctgggtgc
ttggatagtggtgaccccgagacaacctgtcccatatgtggagagtactttaccagtgaa
tacctgcccctgcacgcctcatcctgcgaaggagaggcagagtggttggtacctgaacgc
accatggaaacagacttcagccgaccccacagctccacccctggcccaaacatcaggtcc
tccaccagccccacagatgatctggtttcctgtccactgtgctcctgtagattccccctt
agccagatccagcagcatgcaagcaactgtgaagactgtattaaaacatgtttttcactg
aatggtctgtctaatttgattatcgatgcactgggcaatgatgactctgttgtcctcaag
accgtgaggtctccggatctgcggactcaacaaatcaatatgcagaacctgacgcctgat
caatggcgggagattataaacaagaagatgcgtttcccccaagaactgatcggggccatt
caggaggggaacgctacactggtggcagatctgctgaagactggggatgggatcatccgg
caactggacgactcagaggacaggctatggagagaagcactgaacttggccatccgcctg
ggcagcgaagacatcatggacaccctcttggggggcgttaagttcgacttccggcagatc
catgaggcgctactggtggctgttgacaccaaccagccacgtgtggtcaaaaagctcctt
gaccgcctggacaaggagaagggtgtaggtaacaacaaggtggatgttcgctctttctcg
ctggccatctttgaccactccatcgacgactcacagtttgcccccggtgtgaccccgctg
accctggcctgccagaaggacctgtatgagatagtcaccatgctgaccaataaaggccac
gtaattccccggccgcaccgcatctcctgcgcttgcctggagtgccgtaacgggcgacaa
tatgacctgctgaagttctcgttgtcacgcatcaacacgtatcgtggcattgccagccgt
gcctacttgtccatcacatcagaggacgccatgctgagtgccttccgcctcagccgtgaa
ttgcacaagctctccaagaaggagcccgagttcaagccccagtacctgtgcctggaggag
ctgtgccaggagtttgctgtggaactgctcggcatgtgtcgcaaccagagtgaggtcaca
accatactcaacgactgcgataacgacagtgaggatgaagacgacgggttggacggccgt
gcctttgaggagggcatccccaacctggcccgcctccgcctcgctgtcaactacaaccag
aagcagtttgtggcccatcccatttgccagcaggtgctgtcctcgatttggtgtggcaac
ctctcagggtggaagggcagcagaacagcctggaagctgctggtgtccatcgggatcttc
atcaccatgccattcctctgcatcatctactggattgcacccaagtccaagattggaaaa
atgttgaaaatccctgtgatcaagttcctgctgcactcagccacctacctgtggttcctg
atcacgctgctggccgagtccatcgccatggagatgtaccggaccgaatttgcctcacgt
caccagaacctcttgcataactccctgcacatggtctgggtggctggattcttctggttc
gagtgtaaggaggtgtggattgagggcctacgcagctacttcttggactggtggaactgc
ttggacatgatagtgctcagcatgtacctagcatcctttgtgctgcgtgggctcatcatg
ctcaaaggctattttgtgtgccaggtcccagagcgggcagatgagtgtgcgtacttcaca
caagctgacagagagcactggcgacaggaggatccccaactgattgcagagctgctcttt
gctgtgactagcatgctgagtttcactcgcctagcctacatcctgcctgctcaggagtcc
ctggggaccatgcagatctctattggcaagatgatcgatgacatgatgaggtttatgttc
atcttaatgatcattgggactgccttcctttgcgggatcaacaatatctatgtgccctac
gttgtgtccacgcaccttggccagttcaatgagacattccgtttcctcttctggaccatg
tttggagtggtgagccaggattatgtggacatgccagattttgtggtggctgagtttgta
ggcagggtgctctatggcatcttcaccttgatcattgtcatcgtgctgctcaacatgctt
atcgccatgatcaccaactcgttccagaagattgaggatgacgcggatgtggagtggaaa
tttgcccgttctaagctctaccttaattatttccgagaaggtctcaccatgcctgtcccc
ttcaacatcatcccctcgcccaaggcagccttctacctcatgcggggtatcttccggagg
atctgctgctgctgtaactgcaactcaacaccagactatccgcctattgcctccatttcc
aacgggatgcaaagtgatggagagaaccgggtgccctacagacaacaagtgatccgagcg
ctcgttcagcgatacattgagtcggcccgtcgggagtttgaggaaagcaagcgcaaagat
gtaggtaatcgaatcacggagcttaacaaaatggtgagaaggctgcactcagagatgaaa
cagatccaccagaccgtgctgcacagcagccaagggagttccaactgttcctgcagcgag
gactcctcagtcctgggcaagtacatcctgggggccaagaacaacttcagggggttcagc
agtggcacctacagcccgctgaaggtgaccgtgcatgaagaggagaaggcggaggcggag
gcacagaaggatgcacaggaggtcacaaagacggaggtgaaggagcagaaccttccagaa
ggttgtgaaaaccgggcctcttcccccactggaagcaagggttcttgggacacaggcttt
ggctcccaggaagcggaggaatctagtgaagcaacagcagatacgcaggcgtctgagaat
agcgctgactag
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