Scleropages formosus (Asian bonytongue): 108921221
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Entry
108921221 CDS
T04919
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108921221 (ddx52)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108921221 (ddx52)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
Helicases
108921221 (ddx52)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
Motif
Other DBs
NCBI-GeneID:
108921221
NCBI-ProteinID:
XP_018586087
UniProt:
A0A8C9UZX9
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Position
4:26872945..26879369
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AA seq
632 aa
AA seq
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MDAFELFRKLGAGAKFDLKRFRSDAERFKVVRPQKKEEPGPDDILAGIDFFGGGEHDNVS
ISNKQYQQDDGGEAEEDSRPVGGQPQRAEKRKQDSEAASQKMSKKKKNNKKQTQDLSVVS
VSHQGSVEVEGIQWTSSVSGAAKGPSGANKDKNKFSQKRLKHLHQEKVNRIRHQNRINVH
GIDIPDPVDTFEELQEEYQLNPRIIQNLRAAGFQTPTPIQMQAIPLMLHRREILACAPTG
SGKTVAFCLPLLAHLHQPTNKGFRALIISPTRELASQTHRELCKLSQGIGFRVHIIDKGA
VAAKKYGPKSARKFDILVTTPNRLIYLLKQDPPAMDLSSVEWLVVDESDKLFEEGKTGFR
DQLATIFLACTSPHIRRALFSATFALDVEQWCHLNLDNLVSISIGHRNSAADTVEQELLF
VGTENGKLLAMRDLIKKGFMPPVLVFVQSIERARELFHELVYEGINVDVIHADRTQQQRD
NVVSSFRSGKIWVLICTALLARGIDFKGINLVINYDFPTSAVEYIHRIGRTGRAGHKGKA
ITFFTEDDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKLRRKLEKKPPRRTTIRTTPRF
LMKKGGSKQSRRQRKKKEGDSTELAVTKNSAS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgagctgtttcggaagctcggcgctggagcaaaatttgatcttaagagg
tttaggagcgatgccgaaaggtttaaggttgtcaggcctcagaagaaagaggagcctggt
cctgatgacatcctagccgggatagactttttcggtggaggcgagcatgataatgtgtcc
atcagcaacaaacaataccagcaggatgatggaggcgaggctgaggaagactcccggcct
gtgggagggcagccgcagcgtgccgagaaaaggaagcaagattctgaggctgcctctcag
aagatgagtaaaaagaagaaaaacaacaaaaagcagacacaagatttgagtgttgtgagt
gttagccatcaaggatcagtagaagttgaggggatccagtggacatcatctgtgagtggg
gcagccaaagggcccagtggggccaacaaggacaaaaacaaattctcacagaagagactg
aagcatctccaccaggaaaaggtgaaccggattcggcaccagaaccggatcaatgttcat
ggtatagacatccctgatccagtcgacacctttgaagaactccaggaggagtaccagctc
aacccaagaatcatccagaacctccgtgcagctgggttccagactcccactcccatccag
atgcaggccatccccctcatgttacataggcgggagattctggcctgcgcacccacaggc
tcagggaagaccgtggctttctgtctgccactgcttgcccacctccaccagcccaccaat
aagggtttccgggctctcatcatctctcccactcgggagcttgccagccagacccatcgg
gagctgtgcaagttgtcacagggtattggctttagagtacacatcatcgacaaaggagct
gttgcagccaagaaatacgggcccaagtctgccaggaaattcgacatcctggtgaccaca
cccaatagactgatttatctgctcaagcaggacccacctgccatggatctgagcagtgtg
gagtggctggtagtggacgagtcagacaagctctttgaggaagggaagactggcttccga
gatcagctggccaccatcttcttggcctgcacgtctccgcacattcgtcgagccttgttc
agcgctacttttgccttggatgtggagcagtggtgccacctcaacctggacaacctggtg
tccatcagcatcggacacagaaattctgcagctgacacagtggagcaggaactgctgttt
gttggcacagagaatgggaagctgctggccatgagggacctcatcaagaaggggttcatg
ccgcccgtgctcgtatttgtacagtccatcgagcgggcccgtgaactcttccatgagctg
gtgtacgagggtatcaacgtggatgtgatccatgctgaccgcacacagcaacaaagggac
aatgtggtaagcagcttccgttctgggaagatctgggtactgatctgcactgcgctgctc
gctcgcgggattgacttcaaaggcatcaacctggtcatcaactatgactttcccaccagt
gcagtggagtacatccaccgaattggtcgcacagggagggctggacacaaggggaaggcc
atcaccttcttcacagaggacgacaagcctctacttcgcagcattgccaatgttatcaag
caagctggctgtcctgttcctgattacatgattgggtttaagaagatacacagcaaactg
agacgcaaactggagaaaaagccaccccgaaggacaacgatccgcaccacaccacgattc
ctcatgaaaaagggcgggtccaaacagagcaggcggcagaggaagaagaaggagggagat
tccacagagctggctgtcaccaagaactccgccagctga
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