Scleropages formosus (Asian bonytongue): 108921336
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Entry
108921336 CDS
T04919
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108921336 (hfm1)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108921336 (hfm1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
108921336 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Zw10_middle
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
108921336
NCBI-ProteinID:
XP_018586295
LinkDB
All DBs
Position
25:complement(12475738..12495824)
Genome browser
AA seq
1503 aa
AA seq
DB search
MLDSEDCALPLDSLFYEGPIVQKVKPLHHEKVAWQLEPLPSESEITPTQILQREIKSLCV
TGPYQKSKKFLPPLKKSSVGRNFASERGNPQNPKDELLGYGHPPLLTTEGCAKSQSLLST
DPPKDLSCLPERPLFSSFQFFGNSSKFRRSLFKPPQTWVSEHNAQRSNGPYQNPASGNGV
FTGQAPNVTENPSMISSLTASSQRTSSGLSGADSPQTSMWDHCTQKACIHPLNPQPVSIQ
GQDGSGPAVLRSVTEIPAQFRTVFKEFPYFNYVQSKALDDILYTSKNFVACAPTGSGKTV
LFELAIIQLLMENPPPWCNVKVVYMAPIKALCSQRYENWKQKFGPLGLNCKELTGDTEID
DFFEIQDAHLIMTTPEKWDSMTRKWRDNCLMQLVKLFLIDEVHVVKDSTRGATLEVVVSR
MKTINSYHENENPQSGPSVRFVAVSATIPNMSDIAEWLSDWSGPATCLEMDESHRPVKLR
KVVLGYPCGTNQTEFKFDLSLNYKIANVIQTYSDQKPTLVFCSTRKGVQQSASVLAKDAR
FIMGAEHKQRLMKYASSILDSKLRDLVMCGVGFHHAGIDVSDRKIIEDAFIAGDLPVLFT
TSTLAMGVNLPAHLVIIKSTMHYVSGACEEYSEIDMLQMIGRAGRPQFDTTATSVIMTRS
HTKDKYQQLVSGTETIESSLHTQLVEHLNAEIVLHTISDANVALDWIRSTFLYIRALKNP
SYYGFSSNLDRAGIETRLQELCLKNLNSLATIGLITMDEDINFKPTEAGKLMARYCIAFD
TMKQFSLVSGSETMPELIGLISKGKEFSDVQLRINEKRTLNTLNRDKNRTTIRYPLEGKI
KNSEMKVNCLIQAQLGSIPVQEFGLIQDTGKIFRNGIRITKCLSELLSQNSKKKFTALLN
ALILSKCFRARLWENSPFVSKQLEKIGLTLSTAMVNAGLTTFQKIEQTNARELELIVNRH
PPFGNQIREAVIHLPKYEVSLEQIPRYSISTAEIVVTVNLRNYEQLLSKRTAPDHHFVTL
IIGDCDNNMVFLQKLTDSLLLKSGSWSRKTEVTRTPKGEELSVNLISSEFVGLDIQQKYS
AFYAGAKRFAAETTGSESMPITAPSLQGTLQKAPSSTQRAVGMAHRSPKGAPSVERGSAK
ENMYPNTGKRQCNHFCKNKEQCGHDCCKVGVGTVLKRNTNRESGFSSYLRDLKSRNETFS
ETPVKRLKMKMCEEAAGNIQNFSYQPKGHLPAFSRYEGNYYNSDERADCVESTEDSASAK
QMSKEGSYDKDCNKYLDNLSSGEEQEIKKKPQQSADTLMWGLSSSGYRESSLSPVNQTYG
FSNIPSSDPTDDSEFFSSDNVNFDLRVDDWDDFDDENLVHASETVSMTQGTGCEKPIGYS
APLSPCEQPKSIFIECNRSYGANYTTIRRQALELTPLTHSPKPNNCITSFIKDTKQCDSN
YGTRKRSALQKQSEPNLATQNRQFDFFLKTDVETYTTDLNGRYQGEDSALEMEAFGGILD
GIF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgctggactctgaggattgtgctttgcctttggatagcctgttctacgaagggcccatt
gttcagaaagtaaaacccctgcatcatgagaaagtggcctggcaacttgaaccactccca
tcagagtctgagataacacctacccaaatcttgcagagagaaataaaatctctttgtgta
actggtccttatcagaagtcaaagaaatttttgccccctttgaaaaaatccagtgtgggc
agaaattttgcttcagaaagagggaatcctcaaaaccccaaagatgagctactcggatat
gggcatccccctcttttgaccacagagggttgtgctaaatcacaaagtctgctcagcact
gacccaccaaaggacctcagctgtctgcctgaaaggccacttttcagttcttttcagttc
tttggcaacagctcaaagttcaggaggagtttatttaaacctcctcaaacatgggtttca
gagcacaatgcacagcgcagtaatgggccatatcaaaacccagccagtggaaatggtgtc
ttcactggccaagcaccaaatgtgacagaaaatccatccatgatatcatcccttacagct
tccagtcaacgaacaagttccggtctgtctggtgcagacagcccacagacctccatgtgg
gatcactgcacgcaaaaagcctgcatccatccccttaatcctcagccagtcagtatacaa
ggtcaagatggatcagggcctgctgtcctccgttcagtcactgaaatccctgcacaattc
agaacggtcttcaaagagttcccttactttaattacgttcagtctaaagcccttgatgat
attctatataccagcaaaaattttgtggcctgtgctcctacaggctctgggaaaacagtg
ctgtttgaattggcaattattcaactgttgatggaaaacccaccaccatggtgcaatgtc
aaagttgtgtatatggcgccaattaaagctctttgcagtcagcgttacgaaaactggaag
cagaaatttggccctctagggttgaactgcaaggagctgacaggcgatacggaaattgac
gacttctttgagatccaagatgcacacctcatcatgactacaccggagaaatgggacagc
atgactaggaaatggagggataactgcttgatgcagctggtcaagctttttcttatcgat
gaggtccatgtggtcaaggattcaacccgtggagcgacgcttgaggttgtcgtcagccga
atgaaaacaatcaactcttaccacgagaacgaaaaccctcagtcaggaccctctgtgaga
tttgtggctgtttcagctaccattccaaacatgtctgatattgctgaatggctgtcggat
tggtctggtcccgctacatgtttggagatggacgaaagtcatcgtcccgtgaagctgagg
aaggtggtgctcgggtacccctgtggcaccaatcagacagagttcaagtttgacctgtcc
ctcaattacaagattgcaaatgtcatccagacctactcagatcaaaaaccaactcttgtg
ttttgctccacaaggaaaggcgtgcagcagtctgcatcggtgctagctaaagacgctaga
ttcataatgggtgctgaacacaaacaaaggttgatgaaatatgcaagctccattcttgat
tctaaactcagagatcttgttatgtgtggagtcgggtttcatcatgctggtatagatgtg
tctgacaggaaaataattgaagatgcattcatagctggagacctaccagtactctttaca
acaagtactttggcaatgggagtgaacttacctgcccacctggtgattattaagtccacc
atgcactacgtcagcggggcttgtgaggagtacagcgagatcgacatgctgcagatgatt
ggccgagccggcaggccccagtttgacacgacagcaacttctgtgatcatgacccggtca
cacacaaaagataagtaccagcagctagtcagtgggactgaaaccatcgagagcagctta
cacacacaacttgtggagcacctaaatgcagagatcgttcttcacaccatctctgatgcg
aatgtggccctggactggattcgttccacttttctgtatatccgagctctgaagaatccc
agctactatggtttttcatctaatctggatagagctggaatcgaaacaagacttcaagag
ctctgtctgaagaacctgaactccctggctaccataggtctgatcactatggatgaggac
atcaattttaaacctaccgaggctggtaagcttatggccagatactgcattgcttttgac
accatgaagcagttcagtctggtttctggatcagaaacaatgcctgagttgattggactg
atctctaaaggcaaggagtttagtgatgtgcaactgagaataaatgagaagaggactttg
aacaccttgaacagggataaaaacaggacaacaatcagatacccattggagggaaagatt
aaaaacagtgaaatgaaagttaactgtctgattcaagcccagctaggcagtatccctgtt
caagagtttggacttatacaggatactgggaaaatattcagaaatggaatccggattacc
aaatgtttgtctgaattgctcagccagaactccaagaagaagttcacagctctgctcaat
gccctgattttgtccaagtgcttccgggccagactctgggaaaactcgccatttgtctca
aaacagctggagaaaattggcctgacactttctacagccatggtgaacgcaggactgaca
acattccaaaagatcgagcaaaccaatgccagagagctggagctgattgtcaacaggcat
ccaccttttggaaaccaaatcagagaagctgtcatacatcttcccaagtatgaagtcagt
ctggaacagattccaagatacagcatttcaacagcagagattgttgtcactgtaaactta
agaaactatgagcagctgttgtcaaaaagaactgcccctgaccaccattttgtcacttta
attataggggattgtgacaataatatggttttcctccaaaagctaactgattctttgctc
ttgaaatctggaagctggtcaaggaaaactgaagtcacaagaacacccaaaggagaggaa
cttagtgtaaatttgattagctcggaatttgtgggacttgacattcagcagaagtacagt
gctttctatgctggagctaagagatttgcagcggaaacgactggctcagaaagtatgccg
atcacagcaccaagtctacagggcacattgcagaaagcaccaagtagcacacagagagct
gtgggtatggcacacagatcacccaaaggtgccccatctgtagaaagaggttctgcaaaa
gagaacatgtatccaaatacaggaaaaaggcaatgtaaccatttttgtaaaaataaggaa
caatgtggacatgactgctgtaaagttggtgtggggactgttcttaaaaggaacacaaat
cgggaatctgggttttcatcctacctcagagatctgaaatccaggaacgaaaccttctca
gagaccccagtgaagcgtctgaagatgaaaatgtgtgaagaggcagcagggaacatacaa
aatttttcatatcaacccaagggccatttacctgctttctcaaggtatgaaggaaactat
tataattctgatgaaagagcagattgtgtggaatctacagaggatagtgcaagcgcaaaa
cagatgtctaaagaagggtcttatgataaggactgcaacaaatatctggacaacctgagc
agtggggaagaacaggaaatcaaaaagaaaccacaacagtcagctgacacactgatgtgg
gggctttccagctctggctatagggagtccagcctcagccctgtgaaccaaacctatggc
ttttccaatatcccaagctcagatcccacagatgacagcgagttcttttcttctgataat
gtgaattttgacctgagagtagatgactgggatgattttgatgatgagaatttagttcat
gccagtgagactgtatccatgactcaagggacagggtgtgagaagccaataggttactca
gcaccactgtcaccctgtgaacaacccaaatcaatctttatagagtgtaacagatcatac
ggggcaaactacacaaccatcagacgtcaagcactagagcttacgcctctcactcactcc
cctaaaccaaataactgcattacttctttcattaaagacactaaacaatgcgacagcaat
tacgggactcggaagaggtctgccttgcaaaaacagagtgagccaaacctggcaacacag
aatagacagtttgacttctttttaaagacggatgttgaaacatatacaacagacctaaat
ggcaggtatcagggagaagatagtgctctggaaatggaagcattcggtgggatactagat
ggaatattttag
DBGET
integrated database retrieval system
