Scleropages formosus (Asian bonytongue): 108921360
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Entry
108921360 CDS
T04919
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108921360 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108921360 (gtf2b)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108921360 (gtf2b)
Prokaryotic type
Archaeal type
TFB
108921360 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
108921360
NCBI-ProteinID:
XP_018586341
UniProt:
A0A8C9SDP6
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All DBs
Position
25:12766905..12774327
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AA seq
316 aa
AA seq
DB search
MASTSRGDALPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacaagccgcggagatgcccttcccaaggtgcagtgccccaaccacccagat
gctctgctggtggaagactaccgagcgggagatatgatctgcccagagtgtggcctcgtt
gtgggtgaccgggtcatcgacgttgggtccgagtggcggacattcagcaacgagaaggcc
acgaaggacccgtcccgtgtgggcgatgcccaaaacccgctgctcaacggaggagacctc
accactatgatcagcaagggaacgggtgctgccagttttgatgagttcggaaactccaag
taccagaaccgcaggaccatgagcagctcagaccgggccatgctcaatgccttcaaagag
atcagcaccatggcggacaggattaacctgccccgaaacatcattgaccgaacaaataat
ctattcaaacaagtctatgagcagaagagcctcaagggacggagcaacgatgccatcgct
tcagcttgtctctacatcgcttgcagacaggagggggtcccacggacattcaaagaaatc
tgtgccgtgtcccggatctccaagaaggagatcggccgctgcttcaagctcatcctgaaa
gccctggagacaagcgtggacctcatcaccacgggtgacttcatgtcgcgcttctgctcc
aacctggggctgcccaagcaggtacagatggccgccacatacatcgcccgcaaggccgtg
gagctggatctggtgcccgggcgcagccccatctcagtggctgcagcggccatctacatg
gcttcgcaggcctctgccgagaagaagactcagaaagaaatcggagacattgcaggagtg
gcagatgtcacgatccgacagtcctacagactcatctaccctcgtgctgccgacctcttc
ccgccggacttcaaattcgacactcccgttgacaagctgcctcagctgtga
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