Scleropages formosus (Asian bonytongue): 108921519
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Entry
108921519 CDS
T04919
Symbol
scaf8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108921519 (scaf8)
03041 Spliceosome [BR:
sfm03041
]
108921519 (scaf8)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108921519 (scaf8)
Spliceosome [BR:
sfm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108921519 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
HEPPP_synt_1
RRM_occluded
DUF3525
Motif
Other DBs
NCBI-GeneID:
108921519
NCBI-ProteinID:
XP_018586527
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All DBs
Position
15:5702425..5730585
Genome browser
AA seq
1292 aa
AA seq
DB search
MRPQEVAATLRQCGCSTALDHTGPPVRYAASRCSAAMLASVSEPRACREASCEHSAPTSP
TSITMEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKP
EYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIISTFQNLYRCPPDDKSKIVRVLNL
WQKNNVFKSDIIQPLLDMAVGLPPPSVTPVTGSSAAPVNSTTPGTPATPATPANIVQNLP
DWASQISNTDTVAAVAQILQSPQGQQLQQLVQSLQLQQQKPQPSLLQALDAGLVVQLQAL
TAQLTAAAAANTFNPLEQRVSSFNKKLLGQFDFGNDSERSEESKKDTSSQLPMVSESINS
SLFHQLAEQLQQQNLEQFQKQLLEQQQQQQQQQQQQQQKVPVATHTHLSKSSPQNDLCCF
QRVNYESTMSMEGQETLFGSENSATPTQCSSQQQLQETEVKMDDSIDNQQQDMDIDEGQD
TLDGEIFESEEKAVSTRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKS
SRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQ
IESINMIPPRGCAYICMVHRQDAFRARQKLSTGSYKIGSKVIKIAWALNKGVKQEYKQFW
DVDLGVTYIPWEKVKLDDLERFAEGGMIDQETVNSEWEASRNSEPAKEPPSQPAASSEPS
TSSSTPQTEAFTQPVTMMPVQIPVAQGVPAVSLVPPSFPVTMTMPPPGFGPPPPFLRAGF
NASQPPPGFMPPPVVPQTSVGPGIPSVPTSLVQPSISAAQENSKDSPFGAMVPPVSNIPG
TFIPPAVPGTGVFSPVTVPPQPAPSEKATPTPTADSMDTSPDITLQGMQNAVRSGMGLLG
MHPSASLSHPMHQSGLTSQRMPGLLPLDLRPGLLQAAGARFSLLMQHGVVPQASSIDPTA
QTPARAPFAQADPFTRAEGAFGRPPGQPGDILSKPEEPPVGAERAQQEGDQDYRFPPPEK
QAAAPPREPRESAGRPPLLEAREAIRRPQAEGRRDPLSGFRPESRWGPPRGDFDERDLRG
AAVGGPKGFQDDRPGTGANFPNRFENRGTGWSRGGPPFEPDAHQDLDDRRRPWERQRDRD
DRDFDFRRDVNGSRLSRERDREREHDRDRDRGRERTRDRERDRDRERDRERDRGRDAWVT
PASQPPPPANPETGSGLDQGKAQWLNGGKTDAAMLPKYTSEPTAPPVPETAQSQPDPTEQ
QAPAKEANSELGEPKDEAEKQPVVEKTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacaagaggtcgccgctacattgagacaatgcggctgcagtaccgcgctcgat
cacacggggccgcctgttcgctatgctgcttcgcgctgttcggccgccatgttggcttca
gtcagcgaaccgagggcgtgcagagaagcgagctgcgagcactcagcgccgacgtccccg
accagcatcaccatggaggccgtgaaagctttcaatggcgagttatactctttgaatgag
tacaagcccccaatatccaaagcaaagatgacccagataacaaagtctgcaataaaagct
ataaagttctacaagcatgtcgtgcagagtgtagagaaattcattcaaaaatgcaaacca
gagtataaggtcccagggctatatgtcattgactccatcgtacggcaatcacggcaccag
tttggtcaggagaaggacgtttttgcaccacgcttcagcaagaacatcatcagcacgttc
cagaacctctaccgctgccctccagatgacaagagtaagattgtaagggtgctcaatcta
tggcagaaaaacaacgttttcaagagtgacatcatccagcccctgctggacatggcagtg
gggcttcctcccccaagtgttacaccagtcacaggaagcagcgcagcacccgtcaacagt
actactcccggcaccccagccacacctgctacaccagccaacatcgtacagaacctccct
gactgggcttcacagatctccaacacagacaccgtggctgcagtggctcagatactgcag
tccccacagggccagcagttgcaacagctggtgcagagcctgcaattgcagcagcagaag
ccacaaccctccctactgcaggctctggatgctggcctcgtggtccagcttcaggccctc
accgcccagctcacagctgctgctgctgccaacacctttaacccactggagcagagggtg
tcctctttcaacaagaaacttctgggtcagtttgattttgggaatgattctgaacgctct
gaggagtccaaaaaggatacatcatctcagctgcccatggtctcagagtccatcaacagc
tccctgtttcatcagctggctgagcagctgcagcagcagaacctggagcagttccagaaa
cagctccttgagcaacagcagcagcagcagcaacagcagcagcagcaacagcaaaaggtt
ccagttgctactcacacacatctgtcaaaatccagtccccagaatgacctgtgttgtttc
caaagggttaattatgaatcaacaatgtccatggaaggccaggagaccttgtttggctct
gaaaattcagccaccccaacgcagtgcagtagtcaacaacagctgcaagagactgaagtg
aaaatggatgactctattgacaaccagcagcaggatatggacatcgatgagggccaagac
acactggatggggagatctttgagtctgaggagaaggcagtgagcacacggtcaaggaca
cggtccagatcccgatccaggtctcccagaaagcggaggtcaaggtcacggtcaggctct
cggaagcgtaagcaccggaagcggtcgcgctcacgctccagggagcgcaagaggaagtcg
tcacggtcatactctagtgagaggcgtgcccgggaacgtgaaaaggagcgtcagaaaaaa
gggctgccacctatacgctccaagacactcagtgtgtgcagtacaactttgtgggtgggg
caggtggataagaaggccactcagcaggatctcaccaacttgtttgaggagtttgggcag
atcgaatccatcaacatgatcccaccaagaggttgtgcatacatttgtatggtccacaga
caggatgccttccgtgcccgtcaaaagcttagcactggctcctacaagattggctccaaa
gtgatcaagatcgcctgggctttgaataagggagtgaaacaggaatacaaacagttctgg
gatgtagacctcggagtgacttatatcccctgggagaaggttaagctagatgatctagaa
cgttttgcggaggggggcatgatcgaccaggagactgtcaacagtgagtgggaggcgtca
aggaattcagagcctgccaaggagcccccgagtcaacctgcagccagctcagagcccagc
acttccagcagcaccccacagactgaggccttcactcagcctgtaaccatgatgcctgtg
cagattcccgttgcacagggtgtgccggctgtgagtctggtacctccttcattccctgtc
accatgacaatgccccccccaggatttggcccccctcctcctttcttgagagcaggcttt
aatgcctcccagcctcccccaggttttatgccaccacctgttgttcctcagacatcggtg
gggcctgggattccttcagtaccaacatctctggtccagccctccatatctgcagctcag
gagaactctaaggactccccatttggagccatggtccccccagtgagcaacattcctggg
accttcatccctccagctgtgcctgggacaggggttttcagtccggtaactgtgccaccc
cagccagcacctagcgagaaggccacacccacaccaacggcagacagcatggacaccagt
ccagacataaccctgcaagggatgcagaatgcagtccgaagcggaatgggcctacttggt
atgcacccatctgcatccctcagccatcccatgcaccagtcaggcctaaccagccagagg
atgcccgggcttctgcctctcgacctccgcccaggactgctccaagcagctggggccaga
ttctcccttctcatgcaacatggagtagtcccccaggccagcagtatagaccccactgca
cagaccccagctcgtgccccctttgcccaggctgaccccttcactcgggccgaaggggct
tttgggagaccccctggccagcctggagatatcctatcaaagccagaggagcccccagtt
ggtgcagagcgtgcccaacaagagggggaccaggactaccgctttcctcccccagagaaa
caggcagcagccccacctagggagcctagggaaagtgcaggcagacccccactgctagaa
gcccgggaggcgattcgacgcccacaggcagagggcaggagggatccccttagtggtttc
aggcctgagagtcgctggggcccccctaggggggacttcgatgagcgagatctgcgggga
gctgctgtagggggccccaaaggttttcaggatgatcggccaggcactggtgcaaacttc
ccaaaccggtttgagaatcggggaactggctggagccgtggaggaccccctttcgaacct
gatgcacatcaggacttggatgaccgccgacggccctgggaaagacaacgggaccgtgat
gacagggactttgacttccgcagagatgtgaatgggagccgcctcagtcgtgaacgagac
agggaaagggagcatgaccgtgaccgcgaccgtggccgtgagagaacccgagatcgcgag
cgggaccgagatcgcgagcgggacagggagagggaccggggccgtgacgcctgggtgacc
cccgcatcccagcctccgccaccagccaacccagaaaccggcagcgggctggaccagggc
aaagctcagtggctgaacggtgggaagactgacgcagcaatgctgccaaaatacacctct
gaacccacagcaccccctgtcccggagactgcccaaagccagccggaccccactgaacaa
caggcccccgccaaggaagcaaacagtgagctgggagagccgaaggatgaagctgagaaa
cagccagtggtagagaaaacagagactgaggggacataa
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