Scleropages formosus (Asian bonytongue): 108921614
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Entry
108921614 CDS
T04919
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108921614 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108921614 (hnrnpm)
Spliceosome [BR:
sfm03041
]
Common components
Common spliceosomal components
hnRNP proteins
108921614 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
HnRNP_M_NLS
DUF7552
Motif
Other DBs
NCBI-GeneID:
108921614
NCBI-ProteinID:
XP_018586659
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All DBs
Position
25:17837291..17846139
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AA seq
704 aa
AA seq
DB search
MSFAMSAANGNADMMMEQKEPKEEEEEEEEEEEEEEEDLGSATQCEQYCVKMSTEAGADK
AAGPASGMNGKAVGEPRKERPQKRGGGGGRFEPYGNPSKRYRVFVSNIPFDVKWQALKDL
MKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKAVEKVNKHILNGRPLKVKEDLNG
EFARRAAQRAQGGGPPGGMAMGMGPGPGAPPMVNIPPSLLNNPNIPSEIIHGLQAGKIGS
TVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGMGTITFEMPIEAVQAVSMF
NGQLLFNRVMHVKLDEKSFPKDDFVPPERPPALPRGLSGIGLGLGPGGQPIDTNQLNRGG
STGGMGNMGPGGMEGMGFGMGRMTGMDSFGGGMNNMDRYGPSGMGRMNEMDRAIGGTFDR
DFGRSEMGMSRNSFGESYERGMGTSMPMDRMGSSMDRMGSAMDRMPGMDRMGMDRVSDLD
RLGSGYDRMGSGLDRMGPSMDRMGSGLDRISSSVDRLGPAGFDRMGPSNLDRMSGGMDFM
SPMGMDRMNSGLDRMGSNFDRMGSTGIDRFPSTGLDRMGSSMDRMGSAAVGGQFDRPSDM
ERGRFGAPFGGAPAEGPGANANARKGCQIFVRNLPFDFTWKMLKDTFSSCGHVQYADIKM
DNGKSKGCGVVRFENPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgcgatgagcgcggcgaacgggaacgcggacatgatgatggagcagaaggag
cccaaggaggaggaggaggaggaagaagaagaggaagaagaggaggaggaggacttgggc
tcggcgacgcagtgcgaacaatactgcgtcaaaatgtcgactgaggcgggtgcggataaa
gcagcaggcccagcaagtgggatgaatggcaaggctgtcggagaaccccggaaggagcgt
ccccagaagcgaggaggcggcggcggtcgcttcgagccctatgggaatccatccaagcga
taccgtgtttttgtcagcaacattccctttgatgtgaaatggcaggcgctcaaagatctt
atgaaagaaaaagtgggtgaggttacatacgtggaacacttaatggacgctgaaggcaag
tcgaggggctgtgcggttgttgagttcaggactgaagagctcatgaaaaaggctgtggag
aaggtcaacaagcacatcttgaatgggaggcctcttaaagtgaaagaggacttgaatgga
gagtttgcaaggcgggctgcacagagggcacaaggaggtggtccacctggggggatggcc
atgggcatgggtccaggccctggtgctccacccatggtcaacatccccccaagcctcttg
aataatcccaacatccctagtgagataatccatgggctccaggcagggaaaattggcagt
acagtcttcgtggccaatcttgactacaaggttgggtggaagaagctgaaagaagtgttc
agcatggctggagtggtggtgcgtgccgatatccttgaagacaaagatggcaaaagccgt
ggcatgggcacaatcacctttgagatgcccatcgaagctgtgcaagctgtctctatgttc
aatggccagctgctgtttaacagggtcatgcatgtcaaactggatgagaaatcttttccg
aaagatgactttgtaccacctgagaggcctccagcccttccccgtggtcttagtggtatt
ggcctgggactaggacctggtggccagcccatcgataccaaccagctgaacaggggtggc
agcactggtgggatgggaaatatggggcctgggggaatggaaggaatgggctttggcatg
ggcagaatgacaggaatggacagttttggtggcggaatgaacaacatggaccgctatggc
ccgtcaggaatgggcaggatgaacgagatggaccgtgctattggtggcacctttgaccgt
gattttggacgcagcgagatgggaatgtcacggaacagttttggcgagtcgtatgaaagg
ggaatgggtacctcaatgcccatggatcgaatgggctccagtatggatcgcatggggtct
gctatggaccgtatgccaggaatggaccggatggggatggaccgcgtctctgatctggat
aggctgggttctggttatgatcgaatgggctcaggattggacaggatgggacccagcatg
gaccggatggggtctgggctggaccgcataagctcgagtgtggatcgtctgggtccggca
gggttcgatagaatgggtccatccaatttagaccgaatgagcggtggaatggatttcatg
tcccccatgggcatggaccggatgaactccggccttgacaggatgggttcaaactttgac
cgtatggggtccactggcatcgaccgcttccctagcaccgggcttgaccgcatgggctct
agtatggatcgcatgggctcggctgctgtgggtggccagtttgataggccttcggatatg
gagcgaggacggttcggggctccttttggcggagcacctgctgaggggcctggagcaaac
gccaatgccaggaagggctgccagatctttgtcaggaatctgccttttgacttcacctgg
aagatgctgaaggacaccttttcttcatgtggtcatgtgcaatatgcagacatcaagatg
gacaacggcaagtcaaagggctgtggggtggtccgcttcgagaacccggagactgcagag
agagcctgcaggaccatgaacggctaccggctgaacggccgcgagattgacgttcggatc
gaccgcaacgcataa
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