Scleropages formosus (Asian bonytongue): 108921665
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Entry
108921665 CDS
T04919
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04136
Autophagy - other
sfm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108921665 (atg4b)
04136 Autophagy - other
108921665 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108921665 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108921665 (atg4b)
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108921665 (atg4b)
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108921665 (atg4b)
Membrane trafficking [BR:
sfm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108921665 (atg4b)
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108921665 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
108921665
NCBI-ProteinID:
XP_018586764
LinkDB
All DBs
Position
25:complement(13450349..13456788)
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AA seq
491 aa
AA seq
DB search
MDAATLTYDTLLFGEFEEFPETADPVWILGKEFSALTERDEILSDISSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILAEALLCRHLGRDWRWQRGQRQREEYVSILNAFIDKKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLSVFDSWSRMAVHVAMDNTVVIEEIK
RLCMPWLDFAGGACAEADLEGERGLNGCLEGACAMGVEETVLWKPLVLLIPLRLGLSDIN
EAYMETLKHCFMFPQSLGVIGGKPNSAHYFIGFVGEELIYLDPHTTQPAVEPSDDGQVPD
DTYHCQHPPCRMNIRELDPSIAVGFFCRTEEDFDEWCTRIRKLSCNRDALPMFELVDSQP
SHYANADVLNLTPDSQTQTGWSGSLTLRMRSLRSCRCEECFLLADWKRFFFWARESGVPS
TLLASAGEASSNQLQTLYFTCTINPYVVEKRHSGTTIVFLLFTICTLRTSNFSMKNKKTK
SDSCALSYCCT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccctgacgtacgacacactgctcttcggagagtttgaagagttccct
gaaactgcagatccggtgtggattttgggcaaagagttcagtgctctcacagaaagagat
gagattctttccgatatttcctcccgcctgtggttcacctacagaaaaaacttcccacca
attggaggaacgggccccacgtcggacacagggtggggatgcatgcttcgctgcggtcag
atgatcttggccgaggccctgctctgcagacatctaggccgagactggaggtggcagcgg
ggccagcgacagagagaggaatatgtcagcatcctcaacgctttcatcgacaagaaggac
agctactattccatacatcagatcgcccagatgggtgttggagagggaaagtctatcggg
cagtggtatgggccgaacacagtggcacaggttctcaagaagctgtctgtgtttgattca
tggagccggatggcggtacacgtcgccatggacaacactgtggtcatcgaggagatcaag
cgactgtgcatgccgtggctggactttgccggaggagcttgtgcagaggccgacctggag
ggagagcgggggcttaatggctgcctggagggggcttgcgccatgggggtagaggagacg
gtgctgtggaaacccctggtcctgcttattcccttgcgactgggcctgagcgacatcaac
gaggcctacatggagacgctgaagcactgcttcatgttcccacagtccctgggagtgatc
ggagggaagcctaacagcgcacactacttcatcggctttgtgggcgaggagctcatttac
ttggacccccataccacccagccggctgtggagccatccgatgacggccaggtcccagac
gacacctaccactgtcagcaccccccatgccgcatgaacatccgggagctggacccctcc
atcgcagtggggttcttctgcagaacggaggaggactttgacgagtggtgtacgcgcatc
cgaaagctgtcctgcaaccgagatgcgctgcccatgtttgagctggtggacagccagccg
tcccattatgccaacgccgatgtgctcaacctcacacccgattctcagactcagaccggc
tggagcggttctttgactctgaggatgaggagtttgagatcctgtcgctgtgaagagtgc
tttttacttgcagattggaagaggttttttttttgggctagagagagtggggttccctcg
accttgcttgcttcagcaggcgaagcttcctccaaccagctacagactctttatttcaca
tgcaccatcaacccctatgttgtggaaaaaaggcacagtggaactaccattgtttttctt
ttgtttacaatttgcacactacgtactagtaatttttctatgaaaaacaaaaaaacaaaa
agtgacagttgtgctttatcttattgctgtacatag
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