Scleropages formosus (Asian bonytongue): 108921781
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Entry
108921781 CDS
T04919
Name
(RefSeq) collagen alpha-1(X) chain-like isoform X1
KO
K19479
collagen type X alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
108921781
NCBI-ProteinID:
XP_018586999
UniProt:
A0A8C9RX54
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Position
15:complement(8016444..8021606)
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AA seq
656 aa
AA seq
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MELRVTSVLLLLLGLTVVHGERYYVKKPAKHQYQPYAVKGHVVPMAGDQGPPGEPGAPGE
PGQPGPPGPPGIGLPGPEGPPGPPGPAGYSAAGKPGTPGGPGKPGDRGSTGPRGETGAPG
PQGPRGMPGPAGSPGPAGISSPGKSGPQGATGPMGPRGEPGIKGHPGAPGLPGQKGERGY
GIPGAPGERGATGPMGPAGQPGQPGVGKPGKPGFPGEPGKSGTPGRDGASGPMGPSGAKG
QPGTPGVGMPGKPGENGAPGMPGPMGPKGPQGATGAPGEPGIPGYGKPGVSGQKGERGVV
GSPGTTGQKGEPGPMGHTGHTGATGATGPAGPQGPRGFQGEHGAPGAKGDSGAMGPQGPK
GAKGDQGSRGSDGKSGYPGAAGPVGPRGATGAPGSKGEQGYTGAPGTPGAAGPVGPKGNP
GHDGAPGERGEDGTPGARGPVGPPGPSGLPGAKGHPGLPGSPGPAGVVAKGVPGPRGPPG
LPGSRGQDGIPGPAGPPGPPGPPGEVIFEKGVSPEIMLPGELVKVPTSAFSALLNKPYPP
AGEPIQFDIIVYNAENHYDPNSGIFTCHVPGVYYFSYNLHVNGAHALVALYKNDEPVVFT
YDEYNKGFLDQMSGSTVLALQEEDRVYVKMPNDDANGVFAAENVHCSFSGFLIAST
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgagtgacaagcgtccttcttctgctcctgggcttgaccgtggtacacgga
gagcggtactacgtcaagaaaccagctaagcaccagtaccagccatatgccgtgaagggt
catgtagtgccaatggcaggagatcaaggtcccccaggagagccaggtgccccaggtgag
ccaggacagccaggacctcccggcccccctggtattgggcttccaggaccagagggaccc
cctggacctccaggaccagccggttattctgcagctgggaaaccaggtactccaggtgga
cctggaaaacctggtgacagaggctcaactggtccaaggggagagacaggtgctcccggg
cctcagggtcccagaggtatgcctggccctgctggtagccctggacctgctggtatctcc
tcacctggcaaatctggaccacaaggtgctactggacctatgggtccaagaggcgagcct
ggtattaagggacaccctggtgctcctggcttgcctggacagaagggagagaggggctat
ggcattccaggtgccccaggtgagagaggtgctactgggccaatgggtcctgctggacag
cctgggcagcctggtgttggaaagccaggcaaacccggatttcctggcgagccaggaaag
tcaggtacaccaggtcgtgatggggcttcgggaccaatgggaccgtctggggcaaagggc
cagcctggaactccaggggtaggaatgccaggaaagcctggtgagaatggtgctccaggt
atgcctggccccatggggcctaaaggtccacagggtgctaccggtgcaccaggagagcct
ggcattcctggctatggaaaaccaggagtttctggacagaaaggagaaagaggagttgtt
ggtagtcctggtacaactggtcagaagggagagcctggacctatgggtcatactggtcac
acaggtgcaactggtgctacaggtccagctggtcctcaaggccccaggggtttccaggga
gagcatggagcacccggagctaaaggtgatagtggtgcaatgggaccacaggggccaaag
ggagctaagggtgatcaagggtcacggggttctgatggcaaatcaggttaccctggagct
gccggtccagttggtccacgaggagctaccggagctccaggtagcaagggtgagcaggga
tacactggtgcacctggtaccccaggagcagcagggcctgtagggcctaaaggaaatcca
ggacatgatggggctcccggggaaagaggagaggatggaactccaggagcaagaggacca
gttggtcctcctggtccttctggtctgccaggtgccaagggtcaccctggtcttcctggg
tctcctggccctgcaggtgtagttgcaaagggagtgcctggtcctcggggtcctcctggc
cttcctggttccaggggtcaagatggtatcccaggacctgctggacctcccggcccaccc
ggtccccctggtgaagtaattttcgagaagggcgtgtcccctgagattatgttgcctggt
gagcttgtcaaagtccctacttctgctttctcagctctgctgaacaaaccttaccctcct
gctggagagcccattcagtttgacattattgtgtacaatgcagagaatcactatgatcct
aacagtggaatctttacctgccatgtgcctggagtctactactttagctacaacctgcat
gtgaatggtgctcatgctctggtggctctctacaagaatgatgaacccgttgtgttcact
tacgatgagtacaacaaaggtttcctggatcaaatgtccggcagcactgtcctggctctc
caggaggaggacagagtctatgtgaaaatgccaaatgatgatgccaatggcgtctttgcc
gcagagaacgtgcactgctctttctctggcttcctgattgcctcgacgtga
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