Scleropages formosus (Asian bonytongue): 108921792
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Entry
108921792 CDS
T04919
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108921792 (hnf1a)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108921792 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108921792
NCBI-ProteinID:
XP_018587004
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Position
17:24289384..24297378
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AA seq
561 aa
AA seq
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MDRGERRGSTAPGRLSALQQQLVWALLGSGLSRDVLVQAAGELERERGVAGGDVADKVGG
ESSEEGDEESPPPIYKELEQLPPEEAARQKAEVDQLLQEDPWHVAKLVKSYMQQHNLPQR
EVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVRRQAEINQQFTNAGRGLLMGEESG
EDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQLAG
LGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPFNSQSASSSSHTLSTSPTHDMKYSQQV
TSEGLASSGGHHGDRSVGERLTVSPVQLEPSHTLLETHHKPASGGGPLPPVSTLTALHGV
SASPAAPQGLIMASLPSVMSLGEPSLLIGLTSTQPQTVPVINNVGGGFTTLQPISFQQQL
HAPHQQPITQQFPGHVGPSSFMATMAQLPCHMYSKPELSPYTPSSLLSQAMVITDNSSLG
TLTSLTAVKQILSTDAEDQSEPPIQESSLHLSSSPPVPVSSESLELYPASQPVDDQPPHL
LTSSPTDMDPYIPAQMVSTAQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacagaggggaacgcaggggttcgactgcacccggtcgtctctcggcgctgcagcag
cagctggtctgggccctgctgggttcgggactctcccgggacgttctcgtccaggccgcg
ggggagctggagcgggagaggggcgtcgcggggggcgacgtggccgacaaggtgggaggt
gagagctccgaggagggggacgaggagtccccgccgcccatatacaaggagctggagcag
ctgcccccggaggaggcggcaaggcagaaggccgaagtggatcagctgctgcaggaggac
ccctggcacgtagccaagctggtgaagagctacatgcagcagcacaacctcccgcagagg
gaagtggtcgagtccacggggctcaaccagtcgcacctgtcgcagcacctgaacaaggga
acccccatgaagaaccagaagagggcggcgctgtacacctggtacgtgaggaggcaggcg
gagatcaaccagcagttcaccaatgccggcaggggtctgctgatgggggaggagtctggc
gaggatgtgaggaaaggccggcggaaccggttcaaatggggtccagcatcccagcagatc
ctctttcaggcctatgagcggcagaagaacccgagcaaggaggagagagagggtttggtg
gaggagtgcaacagggctgagtgtctccagcggggcgtgtccccatctcagctcgcaggc
ctggggtctaacctggtgacggaagtgcgagtgtataactggttcgccaaccgccgcaag
gaggaggcctttcggcacaagcttgcgctcgacgtgccttttaacagccaatcagcaagc
tcctccagccacaccctttccacaagccccacccacgatatgaaatacagccaacaggtg
accagcgagggcctcgcgtcgtccggcggtcaccatggagacaggagtgtgggggaacgg
ctgacggtcagcccggtccagctggagccaagtcacactctactggagacacatcacaaa
ccagcgtcaggaggcggccctctgccccctgtcagcactttaaccgctttgcacggtgtg
tcggcctcgccagcagccccgcagggcctcatcatggcctccctgcccagcgtcatgagc
ctcggggagccctcgctcctcattggcctcacctcgactcagccgcaaaccgtcccggtc
attaacaacgtgggcggcggtttcaccaccctccagccaatctccttccagcagcagctc
cacgccccgcaccagcagccaatcacgcagcagttcccgggtcacgtgggtccgagctcc
ttcatggccaccatggcgcagctgccttgccacatgtacagcaagccggagttgtcacca
tacaccccctcgagcctcctgtcccaggccatggtcatcacagacaacagcagcctcggg
acccttaccagcctcaccgcggtcaaacagattctgagcacagatgctgaggaccagtcg
gaaccgcccatccaggaaagctctcttcacctgtcgtccagtccacctgtgccagtgtcc
tccgagagcctggagctgtacccggcgtcgcagcccgtcgacgaccagccgccgcacctg
ctcacgtcctcgccgacagacatggacccctacatccccgcacagatggtctcgaccgcg
cagtag
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