Scleropages formosus (Asian bonytongue): 108921876
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Entry
108921876 CDS
T04919
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfm03016
]
108921876 (pus1)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108921876 (pus1)
Transfer RNA biogenesis [BR:
sfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108921876 (pus1)
Prokaryotic type
108921876 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
108921876
NCBI-ProteinID:
XP_018587110
UniProt:
A0A8C9QY93
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Position
17:complement(25386291..25391738)
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AA seq
438 aa
AA seq
DB search
MLPTWVRGVAGRGLRRVLCEARVLSCAFAKGLRRLESPDRMSAEQLLKERCGEPNEAVKR
SADGPRDRGDGGHVEKRLKTDVAEEESADGRKFPKRKVVLLLAYSGKGFHGMQRNVGSSQ
FKTIEDDLVTALVKSGCIPENHGADMKKMSFQRCARTDKGVSAAGQIVSLKLWLIDNILH
KINSNLPPQIRVLGLKRVTGGFNSKNKCDARTYTYMLPTIAFAPKELDVEDSSYRLDKET
LQRVNQLFSRYKGTHNFHNYTSQKGPRDPSARRYIMEMACGEPFERQGLEFAVIRVKGQS
FMMHQIRKMVGLVIAVAKGYASETVLDRSWGEEKVDIPKAPGLGLVLEKVHFEKYNKRFG
GDGVHEALDWTQEEEEIAAFKEEHIYPSIVQTEMEEKSMVSWMRTLPIHDFEATATGAQE
SRDGKQVGDDDEDGSGSD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctccccacgtgggtgcgcggagttgcaggaagaggcttgcggagggtcctctgcgag
gcgagagttctctcgtgtgccttcgctaaagggctccgccgcctggagtctccggacagg
atgagcgcggagcagctgctgaaggaacggtgcggcgagccgaatgaggccgtcaagcgg
agcgccgacggaccccgggaccgtggcgatggtggacatgtcgagaagagactgaaaacg
gacgtggctgaagaggagtcggccgatgggcgcaagttccccaagaggaaagtggtgctg
ctcctggcctactcgggcaaaggcttccatggcatgcagaggaatgtgggatcctcccag
ttcaaaacaattgaagatgacttggtcacagctctggtcaagtcgggctgcatcccagag
aaccatggagccgacatgaagaaaatgtccttccagagatgtgcaaggactgacaagggt
gtttctgctgcaggtcagatagtttccctgaagctctggctgattgacaacatcctccac
aagatcaactctaaccttcctccccagattagagtattgggcttaaaacgagtaacaggc
ggttttaactccaagaacaaatgtgacgccaggacgtacacctacatgcttcccaccatc
gccttcgctccaaaggagctggacgtcgaggacagcagctatcggctggacaaggagacc
ctgcagagggtgaaccagctcttctcccgctacaagggcacacacaacttccacaactac
acttcccagaaggggccccgggaccccagtgcccgccgctacatcatggagatggcgtgc
ggggagcccttcgagcggcaagggctggagttcgccgtcatccgggtcaaaggtcagagc
ttcatgatgcaccagatccggaagatggtggggctggtgatcgccgtggcaaagggatac
gccagcgagaccgtgctggaccggagctggggcgaggagaaggtggacattcccaaagct
ccaggcctgggtctcgtgctagagaaggtgcactttgagaagtacaacaagcgcttcgga
ggggatggcgtccacgaggccctggactggactcaggaggaggaggagatcgccgcattc
aaggaagagcacatctaccccagcatcgtgcagacggagatggaggagaagtccatggtg
agctggatgaggacgctgcccatccatgacttcgaggccacagctacaggggctcaggaa
agcagggatggaaaacaggtgggagatgatgatgaggacgggagtggatctgattag
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