KEGG   Scleropages formosus (Asian bonytongue): 108921999
Entry
108921999         CDS       T04919                                 
Name
(RefSeq) collagen alpha-3(V) chain
  KO
K19719  collagen type II alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04510  Focal adhesion
sfm04512  ECM-receptor interaction
sfm04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108921999
   04518 Integrin signaling
    108921999
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108921999
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sfm00536]
    108921999
Glycosaminoglycan binding proteins [BR:sfm00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108921999
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108921999
NCBI-ProteinID: XP_029104339
LinkDB
Position
23:14580281..14601101
AA seq 781 aa
MADQQASVPMEDQTLEETAWPAMLLERKVKVGFLELMDYLDPRVHKVLLEILAALDSLDP
LVCLEKMDLTVFLELTVQRPGPPGEPGLDGFPGKPGPKGDEGPPGSRGLTGERGEAGHPG
EPGAIGPRGEKGTQGERGREGPTGPAGEKGDKGDVGPRGPPGIPGNVIPEPGATGKPGEK
GEKGDQGQPGEPGHRGSPGEQGLRGLPGYPGSKGDQGAKGDRGQNGEQGPPGLPGPQGPR
GLPGNVGVPGNAGPPGADGLKGEKGEQGSEGRPGPPGRPGEPGMAGIPGLPGKGKDGLPG
QQGPQGMQGLPGSRGPPGEATSGPPGVRGPPGNPGPQGPPGHNTALQDPQVHLASLAHKV
TRESQVPLGKVAKMGTRALLDLLVLLDLQEQMEQRVQMVHRGLQALRDPQEKRALQERQE
KMADLVSPGNRASKALGENLAHQDLRAIWDPKGRKVMQDHAENRENLVNLVHLEKREFLE
FLTLKLFIEKSMSGLMYLMGLKGPKGESGTPGLPGFPGSKGPSGPPGPVGPDGKTGVSGK
PGERGSKGERGDPGVKGDKGPPGEAGVPGTPGIPGRKGHTGMMGISGPPGDVGPAGSPGT
PGQPGMPGPRGESTSLEQMRRLIQEELTKQLDAKLAYLMAQIQPAHVKSSVGRPGPPGLP
GKDGLPGRTGSPGEPGMPGPAGGDGPRGPMGQKGERGAKGERGESGIGQRGEIGPPGPTG
PQGIPGYGKDGVPGTPGTQGEPGNPGPHGPAGPPGPPGQCDPSQCAYYASLASRPVNVKG
T
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggctgaccagcaggcctctgtccccatggaggaccagacactggaagaaacggcatgg
ccagcgatgctgctggaaagaaaggtgaaagtgggcttcctggagttgatggactacctg
gacccccgggtccacaaggtcctcctggaaatcctggcagccctggactcactggacccc
ctggtttgcctggaaaagatggacttgacggtcttcctggagctgacggtgcaaaggcct
ggaccaccaggagagcctggcctcgatggtttcccagggaaacctggccctaagggtgac
gaaggtcctcctggttcaagaggcctaacaggtgagaggggagaagctggccacccagga
gagccaggagccatagggcccagaggagagaaggggacacagggagaaaggggcagggag
ggaccaactggtccagccggtgaaaaaggtgacaagggtgacgtcggaccccggggacct
cctgggatcccaggaaatgtaatcccagagcctggagcaacagggaagcccggagagaag
ggagagaaaggagaccaaggccagcctggggaacccggtcaccgtggatctcctggtgaa
caaggattgagaggtctaccaggatacccgggttcaaaaggagatcaaggtgctaaagga
gacagggggcagaatggagagcaaggcccaccgggtttgccaggtcctcagggtcctcgt
ggattgccagggaatgtgggggtcccaggaaatgctggtcctccaggagcagatggtctt
aagggggagaagggtgaacagggatcagagggccgtcctggacccccaggtcgcccagga
gagccaggcatggccggaattccaggactaccagggaaagggaaggacggactgcctggt
cagcaggggccacagggaatgcagggtcttcctggaagcagagggcctccaggagaggcc
accagcggaccgccgggagtgagaggtccgcctggaaacccgggcccccaggggccccca
ggacacaatactgccctgcaggacccccaggtccacctggcatccctggcccacaaggtg
acaagggagagccaggtccccctgggaaaagtggccaagatgggtaccagggccctgttg
gacctcctggtcctgctggacctccaggagcagatggaacaaagggtgcagatggtccac
cggggcctgcaggccctccgggacccccaggagaaaagggcattgcaggaaagacaggaa
aagatggcagacctggtgagcccggggaaccgggcttcaaaggccctaggggagaacctg
gcccaccaggatctaagggcaatatgggaccccaagggccgcaaggtcatgcaggaccac
gcggagaaccgggaaaacctggtgaacctggtccatctggaaaaacgggagttcctggaa
ttcctaacattaaagctatttattgaaaagtccatgtcaggattaatgtacctgatgggt
cttaagggacccaaaggagaatctggaactccaggactaccaggctttccaggttcaaaa
ggtccatctggacctcctggtccagtgggtcctgatggaaaaactggtgtgtcgggaaaa
ccaggtgaacgtggttccaagggagaaagaggagatccaggtgtaaagggagataaagga
ccacctggagaggccggtgttcctggaactcctggaatcccaggtagaaaagggcacaca
gggatgatgggaatatcagggcccccaggagatgtaggaccagcagggtctcctggaaca
ccaggacaaccagggatgccaggaccgcggggagagtcgacatccctagaacaaatgaga
aggctcatccaagaagaactaacaaagcagttagacgccaaactggcttacctcatggcc
cagatccagccagcccatgtgaagagcagcgttggacgcccaggaccccctggccttcct
ggcaaagatggacttccagggcgaactgggtcccccggggaacctggtatgccaggccct
gctggaggagatgggccaagaggcccaatgggtcagaaaggtgaaagaggtgctaaaggt
gaaagaggagaatccggtattggacagagaggagagattggtccacctggtcctacaggt
cctcagggtattcctgggtatggaaaagatggggtacctggcacaccaggcactcaggga
gagccaggaaatcctggcccccatggtccagcagggccaccaggaccccctggccagtgc
gacccctctcaatgtgcatactatgccagcctggcttcacgacctgtcaatgtcaagggg
acttag

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