Scleropages formosus (Asian bonytongue): 108922123
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Entry
108922123 CDS
T04919
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108922123
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfm01007
]
108922123
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfm03016
]
108922123
Enzymes [BR:
sfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108922123
Amino acid related enzymes [BR:
sfm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108922123
Transfer RNA biogenesis [BR:
sfm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108922123
Prokaryotic type
108922123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Arc1p_N_like
GST_C_2
Val_tRNA-synt_C
Snapin_Pallidin
GST_C_3
tRNA-synt_1e
GST_C_7
Jag_N
Motif
Other DBs
NCBI-GeneID:
108922123
NCBI-ProteinID:
XP_029115972
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All DBs
Position
18:19859714..19874288
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AA seq
1274 aa
AA seq
DB search
MDTLYVSPHPDDFRSLQALIAAEYSPSRPHIVHGDHPETKSRPALVVGSSGSVLTEVSAV
SWYLSHRGKDSDAKADSQVWQWLSFAENELTPVACGIVFPLLGAMAVDKQVQQNLWMQLK
RVLGALDQTLKPRTYLVGEKISLADIAVAMAVLLPFKYALEQSDRKSFVNVTRWFLTCIN
QPQFAKVLGKVTLCEKMVPISTIANSTSSPTVNGTAINDTAMNGKAVDDKPKTEAQLKKE
AKKREKMEKFQLKKEMEEKKKQEPKTEKKTKPEKKDLGVITYNIPTLPGEKKDVLSPLPD
SYSPQYVEAAWYSWWEKQGFFKPEYGHHSVSEPNPRGIFMMCIPPPNVTGSLHLGHALTN
AIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGLSRHDLGRANFIQEVWK
WKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEEGVIYRSKRLVNWS
CTLNSAISDIEVDKKELIGRTLMPVPGYKEKVEFGVLVSFAYKIEGTDEEVIVATTRIET
MLGDTAVAVHPLDPRYQHLKEKKVVHPFCDRTMPIVFDEFVDMNFGTGAVKITPAHDHND
YEVGVRHNLAFINILDENGYLINVPPPFLGTKRFEARNAVLQALKDKGLFKEVKDNPMVV
PVCSRSKDIVEPLLKPQWYVDCTDMARQAADAVREGRLKIIPDHHLKTWFNWMDNIRDWC
ISRQLWWGHRIPAYFITVNDPSVKPGEDTDDKYWVSGRTEEEARDKAAKRFGVSAEKISL
RQDEDVLDTWFSSGIFPFSIFGWPNESEDLRVFYPGTLLETGYDILFFWVARMVMMGIKL
TGQLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLKDSNLDPVETE
RAEQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFA
MKALGDKFVPAEKTQLSGEESVADRWILSRLCAAVSSCGTGFEAYDFPSITTAIYNFWLY
ELCDVYLESVKPVLSQLDGESAMHQEASICRQTLYTCLEVGLRLLSPIMPFVTEELFQRL
PRRQPYNSPPSISVTPYPETSEFCWHSVEVDRQMEFVMTVVRTIRSLRADYNLTKTRADC
YLQCIDSDTAALVEKYSLQLQTLSYSKSIHAVTGEGGEKGAIPEGCAVAIASDRCTVHLL
LKGLIDTEKEVAKLTSKQAELEKQMERLTEKMQKTDYKEKVPAKVQEQDADKLRQSQIEL
HKVKEAIDNFKKMM
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctgtatgtctccccgcaccctgatgacttcaggagtctccaggctctgatc
gctgcggagtacagcccctcgcgtccacatattgtccatggggaccaccctgagaccaag
tctcggcctgcgctggttgtaggcagtagtggctctgttctgactgaggtcagtgctgtc
agctggtacctctcccacagggggaaggacagtgatgcaaaggctgacagccaagtgtgg
cagtggctgagctttgctgagaacgagttgactcctgtggcttgtgggattgtcttccca
ctgctgggtgcgatggcagtggacaagcaggttcagcagaacttgtggatgcagcttaag
cgcgtcctgggtgccttggaccaaacactgaagcccagaacatatcttgtgggagaaaaa
atctctctggctgacattgcagtcgctatggccgttctcctgccttttaaatacgccttg
gagcagtcagacagaaaatcttttgttaatgtaaccaggtggttccttacctgcattaac
cagccgcagtttgcaaaggttcttggtaaagtcacgctctgtgagaaaatggttccaatt
tccactattgcaaactctacctccagccccactgtcaatggcacagccattaatgacaca
gcaatgaatggcaaagctgtggatgataagcccaagacagaagcccagctaaagaaagag
gcaaagaagcgagagaagatggagaagttccagctgaaaaaagagatggaggagaagaag
aagcaggagccaaaaacagagaaaaagaccaagccagagaagaaagatctaggagtcatc
acatacaacatccccactctccctggggagaaaaaagatgtcctgagccctttgccagat
tcctacagtccccagtatgtggaggctgcctggtattcatggtgggaaaagcaggggttc
ttcaagcctgaatatgggcaccatagtgtgagtgagccaaacccccgtggaatcttcatg
atgtgcatccctcctcccaatgtgactggatctcttcacttaggccatgcactcaccaat
gccatccaagactgtctgactagatggcacagaatgcgtggtgaaaccaccctgtggaac
cctggctgtgaccatgcaggtatcgccacccaggtggtggtggagaagaagctgatgagg
gagcgaggcctgagccgtcatgatctcggcagggcgaacttcatccaggaagtgtggaaa
tggaagaatgaaaagggtgaccgtatctatcaccagctgaagaagcttggctcttcactg
gactgggacagagcttgtttcaccatggatcctaaactatcctatgcagtccaagaagcc
ttcatcaggttgcatgaagaaggggtgatctacaggagcaagaggctggtcaactggtcc
tgtacccttaactctgccatctcggacatagaggtggataagaaggagctgattggaaga
actctgatgccggttccagggtacaaagagaaagtagagtttggagtgctagtctctttt
gcatacaaaatcgaggggacagatgaggaagtaatagtggcaaccactcgtatcgaaacg
atgttgggagacactgctgtagctgtccatcccttggaccccagataccagcacctcaaa
gagaagaaagtggttcacccattctgtgataggacgatgcccatcgtctttgacgagttt
gttgacatgaactttggaacaggtgctgtgaagattactccagcccatgatcacaatgat
tatgaagttggagtgagacacaatctggccttcataaatatcttggatgaaaatggctac
ctcatcaatgttccacctccctttctggggacgaagaggtttgaggccaggaacgctgtt
ctacaggctctgaaggacaagggcctgttcaaggaagtgaaggacaaccctatggtggta
cctgtatgcagtcgctcaaaggacattgtggagccattgctgaagcctcagtggtatgtg
gactgcacagacatggctcgccaggcagctgatgcagtccgggagggcaggctcaagatc
attcctgatcaccacctcaagacctggtttaactggatggacaacatcagggactggtgt
atctctcgccagctgtggtggggtcacagaatcccagcatacttcattacagtgaatgac
ccctctgtcaaacctggggaggacacagacgacaagtactgggtgagcggcaggactgag
gaagaggccagggacaaagcagccaaacgttttggtgtttcagctgagaaaatttctctc
agacaggatgaggatgtgttggacacctggttttcctctggcatcttccccttctctatt
tttggctggcctaatgagtctgaggacctgcgagtgttttaccctggcaccctgttggag
acaggatacgacattctgttcttctgggtagccagaatggtgatgatgggcatcaagctg
actgggcaacttccctttaaagaggtatacctgcatgctgttgtgagagatgctcatggg
aggaagatgagcaagtccctgggaaacgttattgatcccttggatgttatcaccgggata
tctctggagggtctacatgcgcaactgaaagacagcaatttggacccagtggagactgag
agggccgaacagggtcagaaatcggactaccctaacggcatccccgagtgtgggactgat
gctcttcggtttgccctctgcgcctacaccagtcaaggcagagatattaacctagatgtg
aaccgcatcctcggctacaggcacttttgcaacaagctgtggaatgcggtgaaatttgcc
atgaaagctctgggggacaaatttgtgccggcagagaagacacagctgtcgggtgaagag
agcgtagcagacaggtggattctttccagattgtgtgccgcagtcagctcgtgtggcact
gggttcgaggcctacgacttcccctccatcaccacagccatctacaacttctggctctac
gaactctgtgatgtctacttggaaagtgtgaagcctgtgttgagtcagctagatggagag
agtgcgatgcatcaagaagccagcatctgcagacagacgctgtacacctgcctggaggtg
gggctccggctcctctctcccattatgccctttgtaacagaagagctcttccaacgcctc
ccccgacgacaaccctacaacagcccacctagcatctctgtgacgccgtacccagaaacc
tctgagttttgctggcacagtgtggaggtggacaggcagatggagtttgtgatgacggtg
gtccggacaattcgctccctgagagccgactacaacctgaccaagacacgtgccgactgt
taccttcagtgtatcgattcggacactgctgccctggtggagaagtacagcctccagctc
cagaccctgtcttactccaagtccattcatgccgtcaccggggagggtggtgagaaggga
gctattccagagggctgcgccgttgccattgcctcagaccggtgtaccgtccacctgctg
cttaaaggtctcattgacacggagaaggaggtggccaaactgacctccaagcaggccgag
ctggaaaagcagatggagagactgacggagaaaatgcagaagactgactataaagagaag
gtccctgctaaggtgcaggagcaggatgctgacaagctgcgtcagagccagattgagttg
cataaagtgaaggaagccatagacaacttcaagaaaatgatgtaa
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