Scleropages formosus (Asian bonytongue): 108922373
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Entry
108922373 CDS
T04919
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108922373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108922373
Membrane trafficking [BR:
sfm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108922373
Protein recycling
Other Rab GTPase associated proteins
108922373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
108922373
NCBI-ProteinID:
XP_018587989
UniProt:
A0A8C9R6J4
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All DBs
Position
10:14028048..14037971
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AA seq
473 aa
AA seq
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MSQKARRGIHVDQSDLLCKKGCGYYGNASWKGYCSKCWREEYQHSRQKQIQEDRELAERL
QKEEEAALRGAQSQPSLAHFSKFEEKKSNVTTRKVIAVKKFFSPSSHASTKKGSPEARTP
SPSVTRKVSVDTDRASREFVEFLKKLPKHGAEIYKQSKSFAESMAGKEIMGADELTECVQ
DFYQNLSDRLLFTFKWSAEVVEQVMDQVEKYIMTRLYKYTFCPETTDDEKRDLAIQARIR
ALHWVTVQMLCVPVDEAIPTVSENVDHAITEIIKVDSRRVPRDKLACITRCSKRIFRAIK
LTKQEPASADDFLPALIYVVLKAHPPRLHSNIQYITRFCNPSRLMTGEDGYYFTNLCCAV
TFIEKLDAQSLNLSSAEFERYMSGQVSQVDPRSSPGPSLDLLAVLGARQEQVLQGAQKLE
RDLIDWQDGVEREVKRMLQKYPLVVHPAVFAIDSDNTDSDLLPPPLQPQVFTH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaggcacgtagagggatccacgtggaccagtcagacctactgtgcaaaaaa
ggatgcggttactatggcaacgcttcctggaagggctactgctcaaagtgctggagagag
gagtaccagcattcgcggcagaagcagatccaggaggacagggagctagcagagagattg
cagaaggaggaagaggctgctttgcgaggggcacaaagccagccctctctcgcacacttc
tccaagtttgaggagaaaaagagtaacgtgacgacccgcaaggtgatcgctgtgaagaag
ttcttcagtccctcgtctcatgcttcaaccaagaaaggaagcccagaagctagaacccca
agtccctctgttacccgaaaagtcagtgttgacactgaccgtgcatctagagaatttgtt
gaatttctcaaaaaactgccaaagcatggtgctgaaatctacaaacaaagtaagagcttt
gctgagagcatggctggcaaagagattatgggcgcagatgagttgaccgagtgtgtccag
gacttctaccagaacctctcagatcggctgctgttcactttcaaatggtctgcagaagtt
gtggagcaagtcatggatcaggttgagaagtatataatgacacgcctttacaagtacaca
ttctgccccgagaccactgatgatgaaaaacgagacttggcgatccaggcgcggataagg
gccttacactgggtcacagttcagatgctgtgcgtccctgtggatgaggcgatccctact
gtttcagaaaatgtagatcatgccattacagagatcatcaaagtggactccaggcgtgtg
ccacgggacaagctagcatgcatcacccgctgcagcaagcgcatcttcagagctatcaag
ttgaccaagcaggaaccagcctccgctgacgatttcctgcccgctctcatctatgtggta
ctgaaggcccacccaccccggctacactccaacatccagtacatcacacgcttctgcaac
cccagccgcctgatgaccggggaagatggatactacttcaccaacctgtgctgtgcagtg
accttcatcgagaagctggatgcccagtctctcaacctgagctcagcggagtttgagcgc
tacatgtccggacaggtgtcccaggtggatccgaggagcagccccgggcccagcctagac
ctgttggcagtgctcggggcgcggcaggagcaggtcctgcagggtgcacagaagctggag
agggacctgatcgactggcaggatggtgtagagcgtgaagttaagcgtatgctgcagaag
taccccctggtggtgcatcccgctgtttttgccattgactcagacaacacagacagcgat
ctcctccctcctccacttcagcctcaggtctttactcattaa
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