Scleropages formosus (Asian bonytongue): 108922374
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Entry
108922374 CDS
T04919
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108922374 (rnf169)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108922374 (rnf169)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108922374 (rnf169)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108922374 (rnf169)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
108922374 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108922374
NCBI-ProteinID:
XP_018587992
UniProt:
A0A8C9R9P4
LinkDB
All DBs
Position
10:13441758..13449637
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AA seq
687 aa
AA seq
DB search
MAAVSSAKSAGAAPGKTERHRGRGGPMEGAASAARLLTQEEARCPVCSEIFLEPVTMPCR
HSVCLPCFRRTVEQSALRCCPLCRLRVSGWARRQSREKSLVNAELWDMVRRSYPERCERR
MEQEKAEAVGGGVIFRAPVHICKPGEIQQEYEKKKKKGEKEKGEKASGQAIQKILEGDWR
QVDGERQKKTFLRCEELAPIDMSEEKRRVQLHHIEEEGGIPKYFQDSHGVLSDSENEEPI
GKRTRHVSAFVRKTRNSPASSRILQNHAVQRSRSCTDTEEDRRKNSCPLQLNIAPKTYIA
YSHNAGILLSSENSRSLSAPVLFPDKKHPWRSVSATANTFVAPQAKPERSISPESNDSIS
EELNHFKPIVCSPCTPPKRLPDGRVLEPTIVKSTPRNLSRSLQKPTSYEASPTILQKWKQ
IEIDRQVTSKGTITSPFTEDFTQGQSPGEKGKISETSLEKNVLKDCLTVSTPKIDTSGHE
IVKTCNKRRLIFDRLTGESSISVTQVNKTCTPIVDHCTCIAGDSLQGVEIASIAYSGPIS
TLADKKDVEVAVCNQKLTDVLDKSTVSNPRNSIKSTPTSRKGRKRSQKTKHLEEARAPKK
PKSLDEDSLVTETDENSFLERRVQQEKEDHKLALKLQRQFNKECQKVDRRKISPERYLLR
SWVSTDCHSEYNPRRSGRTSKKKEHFN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgagttccgcgaagtccgctggcgctgcacccgggaagacggagaggcac
aggggccgaggcggaccgatggaaggcgccgcctctgccgctcggctcctcacgcaggag
gaggcccggtgccccgtgtgctcggagatctttctggagccggtgaccatgccctgcagg
cactcggtgtgcctaccgtgtttcaggcggacggtggagcaaagcgccctgcgctgctgt
ccgctatgccggctgcgcgtgtccggctgggcccgcaggcagtcccgcgagaagtcgctg
gtgaacgccgagctgtgggacatggtccgccgcagctacccggagcgctgcgagcggagg
atggagcaggagaaggcggaggccgtgggaggaggagtaatattccgagctcctgtccac
atttgtaagcctggagaaattcagcaagaatatgaaaagaaaaagaaaaagggtgaaaag
gagaaaggtgaaaaggcatctgggcaggctatccagaagattttagagggtgactggaga
caagtggacggagagcgacagaaaaagactttcctcagatgtgaggagctggcaccaata
gatatgagtgaggagaagcgacgggtgcagctccaccatatagaggaggaaggtggaata
ccaaagtactttcaagactctcatggagtgttgtcagattctgaaaatgaggagcccatt
ggaaaaaggacacgacatgtgtctgcgtttgtccgcaaaaccagaaactcaccagcctcc
agtcgaattctccaaaaccatgcggtgcaaagaagcaggagctgtacagatactgaagaa
gacaggcgaaagaacagctgtcccttacagcttaatatcgcacccaagacctatattgcc
tatagccacaacgctggaattctgttatcctctgaaaacagccgatccctgtctgctcct
gtactttttcctgacaaaaagcatccatggcgaagtgtttctgctacagccaacaccttt
gtggcgcctcaagccaaaccagagaggtccatcagccctgagagcaatgacagcatttca
gaggagttgaatcacttcaaaccaatcgtctgctcaccctgcacccctccgaaaaggctt
ccagatgggcgagtcctggaacccaccattgtgaagtctacaccaagaaacctaagccgc
agtttgcaaaagcccaccagctatgaggcaagtcccaccattcttcaaaaatggaagcaa
attgagattgatcggcaggtgacctccaagggaaccatcacgagtccattcactgaggac
tttacccagggacaaagccctggggagaagggtaaaatcagcgagacatctttggaaaag
aacgtactgaaggattgcttgactgtttccacaccaaaaattgatacctctggacacgaa
atagtgaaaacttgtaacaagcggaggttgatatttgatcgactcactggggaatcaagc
atttctgtcacacaagtcaacaagacctgtaccccaatagtggaccactgcacatgcatt
gctggtgactcgcttcaaggagtagagattgcatctattgcatatagtggaccaatatca
acacttgcagataaaaaagatgtagaagtggcagtgtgcaatcaaaaactgacagatgtg
ctagacaagagtacagtgtcaaatcccagaaatagtatcaagagcacacctacctcaagg
aagggcaggaagagaagccaaaagactaagcatttggaggaagctagggctccaaaaaag
cccaagtccctggatgaagatagccttgttacagagaccgatgagaattcctttcttgaa
cgtcgtgtgcaacaggaaaaggaggaccataaactggcactaaagctgcaaagacagttc
aataaggagtgtcaaaaagtggacagacgaaagatcagccctgagaggtaccttcttcgg
tcttgggtctcaactgactgtcactcggagtataatccaagaaggtcaggaagaacttcc
aaaaagaaagagcactttaactag
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