KEGG   Scleropages formosus (Asian bonytongue): 108922624
Entry
108922624         CDS       T04919                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108922624 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108922624 (exosc2)
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108922624 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108922624 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2
Other DBs
NCBI-GeneID: 108922624
NCBI-ProteinID: XP_018588369
UniProt: A0A0P7WJ50
LinkDB
Position
6:complement(9674133..9678618)
AA seq 292 aa
MAVDMRLPAVRKQVPSFSEAQEKHLVVPGDVITTDVGFMRGHGTYMDEEKLTASVAGEVE
RVNKLICVQPLKTRFNGEVGDVVVGRITEVQLKRWKVETNSRLDSVLLLSSVNLPGGELR
RRSVEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQVSPSLVKR
QKTHFHNLMCGASIILGNNGYIWLYPTPGQQDEEAGGYYTSLEPISLADREVISRLRNCI
LALAAHKVLLYDTSVLYCYESSKPHKIKNILKPEVMEEIVMETRQRLLEQVG
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcggtggatatgagattacccgctgtccgcaaacaagtaccttcgttttctgaggca
caagaaaaacacctcgttgttccaggagatgtcatcaccactgatgtcggcttcatgcgg
ggtcatgggacctacatggatgaggagaagctgaccgcctctgtggctggagaggtggag
agggtcaacaagctcatctgtgtgcagcccttgaagaccaggttcaatggtgaggtggga
gacgtggttgttggacggatcacagaggtgcagctgaagcgctggaaggtggagaccaat
tcccgcttggactcggtgctgctgctgtcctcggtgaacctgcccggaggagaactgagg
agaaggtcagtagaagacgagctgaccatgagagactatctccaggaaggggacctcatc
agcgctgaggttcagtctgtgttttcagatggagctctgtctctccacacccgcagtctg
aagtatggaaagctggggcagggagtccttgtgcaggtgtctccttccttggtgaagaga
cagaaaacgcacttccacaacctgatgtgtggtgcttcaattatcctgggcaacaacggc
tacatatggctgtaccccacccctggccagcaggatgaggaggcagggggatattacacc
agcttggagcctatttctctggctgaccgtgaagtgatctccaggctgaggaattgcatc
cttgctctggctgcccacaaggtgttgctgtatgacacaagcgtgctgtactgctatgag
tcctccaagccgcacaagatcaagaatattcttaaacctgaagtgatggaagaaattgtg
atggaaacgcggcaacggcttttggaacaagtagggtag

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