Scleropages formosus (Asian bonytongue): 108922624
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Entry
108922624 CDS
T04919
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108922624 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108922624 (exosc2)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108922624 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108922624 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108922624
NCBI-ProteinID:
XP_018588369
UniProt:
A0A0P7WJ50
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Position
6:complement(9674133..9678618)
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AA seq
292 aa
AA seq
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MAVDMRLPAVRKQVPSFSEAQEKHLVVPGDVITTDVGFMRGHGTYMDEEKLTASVAGEVE
RVNKLICVQPLKTRFNGEVGDVVVGRITEVQLKRWKVETNSRLDSVLLLSSVNLPGGELR
RRSVEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQVSPSLVKR
QKTHFHNLMCGASIILGNNGYIWLYPTPGQQDEEAGGYYTSLEPISLADREVISRLRNCI
LALAAHKVLLYDTSVLYCYESSKPHKIKNILKPEVMEEIVMETRQRLLEQVG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatatgagattacccgctgtccgcaaacaagtaccttcgttttctgaggca
caagaaaaacacctcgttgttccaggagatgtcatcaccactgatgtcggcttcatgcgg
ggtcatgggacctacatggatgaggagaagctgaccgcctctgtggctggagaggtggag
agggtcaacaagctcatctgtgtgcagcccttgaagaccaggttcaatggtgaggtggga
gacgtggttgttggacggatcacagaggtgcagctgaagcgctggaaggtggagaccaat
tcccgcttggactcggtgctgctgctgtcctcggtgaacctgcccggaggagaactgagg
agaaggtcagtagaagacgagctgaccatgagagactatctccaggaaggggacctcatc
agcgctgaggttcagtctgtgttttcagatggagctctgtctctccacacccgcagtctg
aagtatggaaagctggggcagggagtccttgtgcaggtgtctccttccttggtgaagaga
cagaaaacgcacttccacaacctgatgtgtggtgcttcaattatcctgggcaacaacggc
tacatatggctgtaccccacccctggccagcaggatgaggaggcagggggatattacacc
agcttggagcctatttctctggctgaccgtgaagtgatctccaggctgaggaattgcatc
cttgctctggctgcccacaaggtgttgctgtatgacacaagcgtgctgtactgctatgag
tcctccaagccgcacaagatcaagaatattcttaaacctgaagtgatggaagaaattgtg
atggaaacgcggcaacggcttttggaacaagtagggtag
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