Scleropages formosus (Asian bonytongue): 108922810
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Entry
108922810 CDS
T04919
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108922810 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108922810 (fip1l1)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108922810 (fip1l1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
108922810
NCBI-ProteinID:
XP_029110364
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Position
9:32374219..32386469
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AA seq
644 aa
AA seq
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MTSAVRPASDALTRNTALGSSSAPDSKLEKRLTLRAPASSRLAAPRFQWRLSAQSSSMNT
AAPLTLDSASSHLRLGRRSQCSQAAMSAEEAERTTTDVSAGDDEEEWLYGDENESKQEGE
EMEASVTASALAPPPEEEEAAGNGVASQQPAAEEEDSNSDSDDDDDDDVRVTIGDIKTGA
PQYGAYGAAPVNLNIKTSGRPYVPAGTKPKGIDLDAPGSINGIPVLEVDMESFEEKPWRK
PGADLSDYFNYGFNEDTWKAYCEKQKRLRMGLDVMTLASATSKIMVQQGRTGNSERESAL
STPKVDFASPGSVYKAAAPTTRISPPQWPGGPMQDSSSSSFYTKNSGTIDVIGGQTATIS
RVEGRRRHNVDGNNIQVISEHPSSDAEPTPAKMPPFFPPGPIPPNIPPPPFLPPPPNVSS
APPLIPPPRIPITVPPPGFPPPPGPPPPSLIPTLDSAHSGGYDSRQVPTYTFSAGGFPPL
ASAVSTWPGVVDSAKQWDYYSRRDKERERDKERDRPRERVHERERDRDRERERDREREHS
PSTPAYNSDEERYRYREYSERGYERHRDRSSREKEERHRERRHRDKEEGRHKSSRSSSRR
RHDSEEGDAHRRHKHKKSKRSKEGKEASEENSAEQENQDGGAAE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggccgtgcggcccgcgagcgacgcgctcacgaggaacacggccttgggctcg
tcctcggcgccggactcgaagctggagaagcgcctcacgctgcgcgctccagcctccagc
aggctcgcggcgccccggttccagtggaggctctcggcgcagagctcgtcgatgaacaca
gccgcgccgctcaccctggacagcgcctcgtcccacttgagactcggcagacgcagtcag
tgcagccaggccgcgatgtcagcagaagaggcggagaggactactaccgatgtgagcgcc
ggggacgatgaggaggagtggctctatggagatgaaaatgagagcaagcaggagggagag
gagatggaggcatctgttactgccagtgccttggctccaccccctgaggaagaggaggct
gctgggaacggtgtggccagtcagcagcctgctgcagaagaggaggacagcaatagcgac
agtgatgatgacgatgatgacgatgtccgtgttaccattggcgatataaagactggggcc
ccgcagtatggggcatacggagcagcgcctgtgaaccttaacataaagaccagcgggcga
ccgtacgtgccagctggcaccaagccaaagggcatagacctggatgcccctggcagcatc
aatggcatccctgtacttgaagtggacatggagtccttcgaggagaagccctggaggaag
ccgggagctgacctttcggactatttcaactacggcttcaacgaggacacctggaaggcc
tactgtgagaagcagaagaggctgcgcatggggctggacgtcatgacgctggcatcagcc
acaagtaaaatcatggtgcagcagggccgcacgggcaacagcgagagggagtctgctctg
agcacccccaaggtggattttgcctcccccggcagtgtgtacaaggcagcagcgcccacc
accaggatctcccctccccagtggcctggtggccccatgcaggactcctcctcctcctcc
ttctacacgaagaactctggcaccattgatgtcattggaggacagacagctaccatcagt
cgcgtagagggacgccgccgccacaatgtggatggcaacaacatccaggtgatctcggaa
cacccgtcctctgacgctgagcccacgcctgccaagatgccccccttcttcccccctggg
cctatccctcccaacatccccccgcctcccttcttgcctccacctcccaatgtgagctcc
gctcctccgcttattcccccaccaaggatacccatcaccgtcccgccacccggtttccct
ccccctcctggcccaccgcctccttctctgatccccaccttggacagcgcacactcggga
ggttacgacagccgccaggtgcccacatacaccttctccgcaggaggattcccgccccta
gcgagtgccgtgtccacgtggcccggtgtcgtggacagcgccaagcagtgggactactat
tcgcggcgcgacaaagagcgtgagcgcgacaaagagcgcgacaggccccgtgagagagtt
cacgagcgcgaacgggaccgagatcgggagcgtgagcgggaccgggagcgtgagcacagc
ccctcaacgcccgcctacaacagcgatgaggagcgctaccgataccgtgagtacagtgag
cgtggttacgagcgccacagagaccggtccagtcgggagaaggaggagcggcatcgagag
agacgccaccgcgacaaagaggaagggcgacacaagtcttcgcgcagcagcagcaggagg
cgacatgacagcgaggagggcgacgcccatcggcgccacaagcacaagaagtccaagagg
agcaaggagggcaaggaggccagcgaggagaactcggccgagcaggagaaccaggacggc
ggcgctgcggagtga
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