Scleropages formosus (Asian bonytongue): 108923082
Help
Entry
108923082 CDS
T04919
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108923082 (syvn1)
04120 Ubiquitin mediated proteolysis
108923082 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108923082 (syvn1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108923082 (syvn1)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108923082 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108923082
NCBI-ProteinID:
XP_018589088
UniProt:
A0A8C9W4H6
LinkDB
All DBs
Position
13:28427529..28434419
Genome browser
AA seq
610 aa
AA seq
DB search
MVRAALVTATSLALTCAVVTHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMALLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASLPNQTQVQPPAQPVAPPPAANPP
VPPPGNVPPGMMPPFAPGLFPFWGPFPAAAPPVAAPGPQAPTDSPQTGTEGAQSQAAGPS
RPAQQGPDAAPLPTGAAIPGFPFSFPPPLPTAPWLAMPPPPPFVSSMPPPPASLSSLSEA
ELRELEQEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRSESSGNEAAAPG
GAETAAVNSSTADDAQMHREQTGESVQGAAGITTPDSTTEEEAKEDSEPNAAELRKRRLR
KLETAAQPEQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccctggtgacggccaccagtttggccctcacttgtgccgtggtcacc
cacgcctactatctcaaacaccagttctaccccacggtggtctacctgaccaagagcagc
cccagcatggcggtgttgtacatccaggcattcgtgctggtgttcctcctggggaagttc
atgcgcaaggttttctttggacagctgcgagcagctgagatggagcacctgattgagcgg
tcctggtacgcggttacggaaacgtgcctggccttcacggtgttccgcgatgacttctct
cctcgatttgttgccctcttcaccctgctgctcttcctcaagtgcttccattggttggct
gaggacagggtggactttatggagaggagtcccaacatctcctggatctttcatttcaga
gtgctctctttgatggccttgctaggagttctggacttcctgtttgtcaaccacgcctgc
cacagcatcatcacccgtggcgcttcagtccagcttgtctttggatttgagtatgcaatc
ctgttgacgatggtcctcaccaccttcatcaagtacacactccacactattgacctgcag
agcgagaatccttgggacaacaaggcggtctatatgctctacacagagctcttcacaggg
ttcatcaaagtactgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
cccctctttgccatccgccccatgtacctggctatgaggcagttcaagaaagccgtgacg
gatgcaatcatgtctcgacgggccattcgcaacatgaacacactgtacccagatgccacg
cctgaagacctgcaggccaccgacaatgtgtgcatcatctgcagggaggagatggtgacg
ggtgccaagaagctgccctgcaaccacattttccactccagctgccttcgctcctggttc
cagaggcagcagacatgtcccacctgtcgcatggatgtgctgcgtgcctctctgcctaat
cagacacaagtccagccccctgcacagcctgtagctccacctcctgctgccaatccgccc
gtcccgccaccaggtaatgtgcctcctggaatgatgccccccttcgcacccggactcttc
cctttctggggacccttccctgctgcggcgccccctgtggcagcccctggtcctcaagcc
cctacggattcaccccagacggggactgagggagcccagtcacaggctgctggccccagt
cgccctgcccagcagggtcctgacgcagctcctctacccaccggggctgccatcccagga
ttccccttttccttcccacctccgctgcctactgctccttggctggccatgcctccgcct
cccccttttgtgtcctccatgccaccacccccagcctccttgtccagcctctcggaggcg
gagctcagagagctggagcaggaaggtcgccgaggcctggaggctagactgcagtgtcta
cagaacatccacacgctgctggatgctgccatgctcaacattcaccactacctgtccaca
gtggccacactcagccctccgcgttccgaaagctctggcaacgaggcggcagcgccagga
ggggcggaaacagctgcagtgaacagcagcacagcagatgatgctcagatgcacagggag
cagacaggtgaatctgtgcagggtgcagcaggcatcacgacccctgactccaccaccgag
gaagaggccaaggaggacagcgaacccaacgctgccgagctgcggaaacgacgcctccgt
aagctggagacagcggcgcagcctgagcagtga
DBGET
integrated database retrieval system
