Scleropages formosus (Asian bonytongue): 108923101
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Entry
108923101 CDS
T04919
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04510
Focal adhesion
sfm04512
ECM-receptor interaction
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108923101
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108923101
09142 Cell motility
04820 Cytoskeleton in muscle cells
108923101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108923101
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108923101
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108923101
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108923101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108923101
NCBI-ProteinID:
XP_018589136
LinkDB
All DBs
Position
13:complement(21748178..21811847)
Genome browser
AA seq
1700 aa
AA seq
DB search
MVIWVFVLTVVLAAEFAHGGAKFQEPCSGQDCSEGCQCNPEKGGRGQPGPLGPVGPNGAE
GSAGGQGPLGPRGEKGHHGPTGLTGPTGDKGPMGVPGFPGADGVPGHPGQDGSRGLPGYD
GCNGSAGDSGLRGQDGQEGPPGMQGPRGLKGQKGESVYSGPNSGGPKGQPGLPGLDGLIG
PQGPPGFPGLIGPRGPDGFPGSPGPPGSPGPTGSAGQGLQGERGDRGDAGPPGPPGQPGE
ETLVEGPTISTSFRGDKGEPGVKGEPGQPGLPGPPGPFGYPGEVGEKGILGLPGGRGSPG
LNGPRGPPGRQGFIGDPGFPGQSGFSGPKGSRGDLGPPGPPSYIDKPGEYVQGPRGDPGA
SGLPGDPGDQGPDGLPGLPGLPGVMSFLRGLPGSQGVPGSSGPKGERGNPGQPGIENEGV
KGRSGLPGPPGPPGPPGPRASSPGVFLGEQAGPPGPKGQRGPTGTKGTKGLKGDFGDCQC
VGGGEVGQEGPQGQRGPPGLTGFFGRKGETGNQGPQGFPGASGPKGRAGERGLPGQKGEK
GKSFFPLRRGAKGDQGVKGLQGIPGVMGRPGRDGLPGFPGQPGLPGDSGIGLIGDRGFPG
PSGEKGRQGDIGEPGLGYPGNTGVRGPPGDPGFDGPPGQSGLPGPPGDFLCRVAEVNEAS
VAEGGNTLLCRIQAEGGDPGLPGLPGPPGPKGQPGFPGEDGQKGFEGTKGERGESGFGGQ
PGPQGFPGPRGEAGAPGLPGESFPGLSGKDGLPGLPGEKGQPGEVLEVIEGPQGLPGLAG
GPGDKGQPGEPGLLGPPGLEGSSGDPGEKGERGEDGFPGLQGPPGPPGDSTQGLKRGPPG
AAGMKGFIGAPGFPGLKGSAGEPGIPGPSGMKGLPGPQGSPGQSGPRGFPGSPGPGGRDG
ILGPPGKKGERGVPGMLGFPGMAGVPGIPGVPGVKGTSGSPGRDGPQGESGAKGQKGDQG
NPGPPGLPSLPPLAEVLEKGERGSSGPSGPPGFPGPRGDKGFQGQPGGPGLPGLPGVLSM
EKGAPGVPGLAGFPGSLGLPGPKGSPGIIGFPGMPGPPGEDGIPGVPGFPGGPGQQGEKG
ERGDTISLPGAPGSKGVPGDPGIPGGRGNPGPQGDAGNPGDSGFSGQKGAQGVQGSRGLT
GTPGFPGNVGLIGLPGKRGLEGLAGLLGAPGAEGPKGFPGAPGLDGLNGLGGPKGPPGTP
GLSERGRPGNQGPDGFKGERGVSPPGVPGLIGEKGLRGESGTQGLPGFPGLPGPRGSPAM
SGILGPPGDPGLPGLDGEQGFRGPPGPPGPVGPNTVQGERGDSGLPGLPGSPGPRGDPGE
AGDPGNPGVFGIKGEMGEIGFSGLPGQPGLPGDTGIFGIKGPKGSQGPRGRKGLPGTTDP
PLIEKVPPGDEGFPGIPGLTGEEGDPGLSGLPGRPGPKGRVGTPGSLGRPGQMGPPGPLG
DPGTPGLRGPIGERGIAGKQGPPGVPGLSLPTLSMGYTLVKHSQTSEVPTCPQGMAPLWE
GYSLLYVEGQEKAHNQDLGLAGSCLPRFSTMPFLYCNINELCYFASRNDKSYWLSTTAPI
PMMPVAEDQIAGYISRCSVCEAPSQAVAVHSQDLTIPSCPVGWRSLWIGYSFLMHTAAGA
EGGGQSLVSPGSCLEDFRTTPFIECNGARGTCHYFSNKYSFWLTTVQPEEQFQQAPQQET
LKAGQLRTRVSRCQVCMKVL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctgggtatttgtgcttactgtagttctggcagccgagtttgcgcacgggggt
gcgaagttccaggagccatgctcaggacaggactgcagcgaagggtgccagtgtaacccg
gaaaagggcggaaggggtcagccaggacctcttggacctgtaggaccaaatggagctgaa
ggttctgcaggaggccagggccccttggggcccagaggggagaagggccaccatggacca
acaggtctaacgggaccaacaggagacaagggtccgatgggtgtgccagggtttccagga
gcagatggggttccgggtcatcctgggcaggatgggagcaggggactccctggatatgat
ggctgcaatggctctgctggagactcaggcctccgtggacaggatggccaggaaggtcct
cccgggatgcagggaccacgagggctaaaaggccaaaaaggagagtctgtgtactctgga
ccaaacagcggtgggcccaagggacaaccaggattgcctggattggatggcctgattggc
ccacaaggtcctcccgggttccctggtctgatcggtcccagaggtcctgacggctttcca
ggctccccaggcccccctggctcacctggcccaacaggcagtgcaggccagggccttcag
ggggagaggggagacaggggggacgcgggtccacctggacccccaggacagccgggggag
gaaacgctagtagaagggcccactataagcacttccttcagaggagataagggtgaacct
ggagtcaaaggggaaccaggccaaccagggcttccaggacctcccggaccctttggttac
ccaggtgaagtcggtgagaagggaattctgggactgccaggaggacggggttctccaggt
ctgaatgggccccgtggaccacctggtagacagggcttcataggggaccctgggtttcct
ggtcagtcaggattctctggacctaagggcagtcggggtgacctgggccccccaggccct
ccttcctacattgacaagccaggagaatatgtacaaggtccccgtggtgatcctggtgct
tctggtttacctggggaccctggagaccagggacctgatggtttgccagggctacctggc
ctcccaggagtcatgagtttcctcagaggtctgccaggctctcagggagtgccaggatct
tcaggacccaaaggggagcggggaaaccctggtcagccgggcattgaaaatgagggagtg
aaggggagatcaggtttgccagggcctccaggtcctccagggccccctggccccagagcc
tcatctccaggtgtgttcctaggtgaacaagctggaccgcctggaccaaagggccagagg
ggtcccactggtaccaagggcaccaaaggactgaaaggagattttggagactgccagtgt
gtaggtggtggagaagttgggcaggagggacctcagggccaacgtgggccccctggctta
actgggttctttggtaggaagggtgaaactggcaatcaggggccacagggcttccctggt
gcctcaggccctaagggacgtgcaggagagcgagggttaccagggcagaagggagagaag
ggcaagtctttcttccccctgcgccggggtgcaaagggtgaccaaggtgttaagggactg
cagggaatcccaggggtcatgggccggcctggaagagatggactgcctggcttcccaggg
caacccggacttcctggtgacagcggcatagggctcattggagatagaggctttcctgga
ccctcaggagagaagggccgacaaggagacattggggagcctggacttgggtacccaggt
aacacaggtgttcgtggaccacctggtgacccaggctttgacggccctcctggacaatct
ggattacctggaccaccaggtgactttctctgtcgggtggcggaggttaatgaagcctct
gtcgcagagggaggaaatacgctgctatgtcggatccaagccgagggtggagacccaggc
ctccccggcctgccaggacctccaggtccaaaaggacaacctggctttcccggagaagat
ggtcaaaagggttttgaaggcacaaaaggcgagaggggggaatctggctttggaggacag
cctggcccacaaggctttccagggccccgaggggaggcgggggcccctggactaccaggt
gagagctttccaggactgtcaggcaaggatggccttccagggctgcctggagagaagggg
caaccaggtgaggtgttggaggtcattgaggggccccagggcttgccgggcctggctggt
ggaccaggggacaagggccagcctggggagcctggactgctggggccacctggcctcgaa
gggagctcaggggatcctggggaaaagggggaacgtggtgaggatggcttcccagggctc
caaggtccacctgggcccccaggggacagcacccagggtttgaaacggggaccaccagga
gccgcggggatgaagggtttcattggagctccaggattcccaggactcaagggctcagca
ggtgaaccaggaatccctgggccttctgggatgaaaggcctgccaggaccacaaggaagt
ccagggcagtctggacccaggggcttcccaggctccccaggacctgggggacgagacggc
atccttggaccacctggaaaaaagggcgagagaggagtacctgggatgcttggattcccc
ggcatggctggagtgccagggatccctggggttcctggtgttaagggtacatcgggttcc
cctggacgagatggtccgcaaggagaatctggagcaaagggccagaaaggggatcaggga
aaccctggacctccagggcttccgtctcttcccccactggcagaggtcctggagaaaggg
gaacgtggaagcagtgggccaagcggacctccagggtttccaggtccaagaggtgacaaa
ggtttccagggtcagcctggtgggccaggcctgcctggactacctggggtcctgagcatg
gaaaagggagctcccggggtccctggattggctggtttcccaggtagccttggcctccca
ggtccaaagggttcccctgggatcatcggatttcctggaatgcctggaccaccaggggaa
gatgggataccaggtgtacctggattcccgggtgggcctggccagcaaggagaaaaaggt
gagcggggtgacaccatcagcttacctggagccccaggcagtaaaggtgtacccggagac
cctggaattccaggtggcagagggaacccaggtccacagggtgacgctggcaaccctggt
gactctggcttcagcggccaaaagggcgcccagggggtacagggcagtcgagggctgaca
ggtaccccaggtttccctggcaacgtgggcctgattgggttgccaggcaaaagggggctg
gagggccttgctggacttcttggagctccgggtgctgaaggcccgaaaggatttcctggt
gctcctggacttgatgggctcaatggactggggggacccaagggcccacctggaactcca
ggtctgagtgaaagaggtcgtcctggaaaccaaggccctgatgggttcaagggtgaaaga
ggagtcagccctcctggagtgcctgggctcataggagagaagggcctcagaggagaatca
ggtacccaaggtctgccaggcttccctggccttcctggacctcgaggaagtcccgcgatg
tctggcatccttggcccaccaggagaccctggcttacctggtttggatggagaacaaggg
tttcgtggccctccaggacccccaggcccagtagggcccaacactgtacagggagagaga
ggcgattcaggccttcctggcctgcctggctctccaggcccacgtggtgatcctggtgaa
gctggagaccctggaaaccctggagtctttggaatcaaaggcgagatgggggaaattggc
ttcagtggacttccaggacaacctggcctgccaggggacactggaatctttgggattaag
ggaccaaagggttctcaagggccacgtggccgcaaggggctacctgggaccactgaccca
cctctgattgaaaaggttcccccaggggatgaaggtttcccaggcatacctggacttact
ggagaggagggggacccaggactgtcaggactaccaggacgtccaggcccaaaagggcga
gttggaaccccagggtcactgggacgtcctggacaaatgggtcctcctggacctctagga
gacccagggacccctggtttacgtggaccaattggagagcgagggatagcaggcaaacaa
gggccccctggtgtgccaggactatcactgcccaccctcagcatgggctacacactggtg
aagcacagccagacaagtgaggttcctacctgtccacagggaatggctcccctttgggaa
gggtacagtctgctctacgtggaaggccaggagaaggctcacaatcaggacctgggtctg
gcaggttcctgtctaccacggttcagcactatgcctttcctctactgtaacatcaatgag
ctgtgctactttgcaagccgcaatgacaaatcatactggctttccacgacggcacccatc
cccatgatgcctgtagctgaagaccagatagcgggatacatcagccgttgctcagtgtgt
gaagctccctcccaggctgtggccgtacacagtcaagacctcaccatcccctcctgccct
gtgggctggcgcagtttgtggattggctactccttcctgatgcacactgcagctggggcg
gaaggtggaggccaatccctggtctcacccggctcctgtctggaagacttccgcacaaca
cccttcattgagtgcaacggcgcccgtggcacctgccactacttctccaacaagtacagc
ttctggctgaccacggtgcagccggaggagcagttccagcaggcgccgcagcaagagaca
ctgaaggccggacagcttcgcaccagagtcagccgctgccaagtctgcatgaaggtcctg
tag
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integrated database retrieval system
