Scleropages formosus (Asian bonytongue): 108923251
Help
Entry
108923251 CDS
T04919
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108923251
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Cadherin related
108923251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Cadherin_C_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
108923251
NCBI-ProteinID:
XP_029103713
LinkDB
All DBs
Position
2:complement(41398174..41434311)
Genome browser
AA seq
973 aa
AA seq
DB search
MRPRAHGPPAALLLLALLGALHAAKVNKHKPWIETAYHGIVTENDDKVLLDPPLIVLDKD
APLRYAERFEVTVTRAGEICGFRVHGQNVPFEVVLVNGSTGEGAVRAKEKLDCELQKEHT
FTIQAFDCGEGPDGTNMKKSHKATVHIQVNDVNEYSPAFKEKSYKATVVEGRRYDSILRV
EAVDADCSFQFSQICSYEIVTPDVPFTIDKDGYIKNTEKLSYSKERVYKLTVTAYDCGKN
RATEDVLVKISIKPTCKPGWQGWNKRMEYEPGTGSLALFPSMHLETCEEPITSIQARVEL
ETSHIGKGCDRDTYSEKSLHRLCGATSGTAELLPAPSSSAHWTASLPTDNGHDSDQVFEF
NGTQAVKVPEGVVSSSLAQPFTISVWMRHGPGGQDKETILCNSDKTEMNRHHYALYVHNC
RLVFLLRQEPSESESYKPAEFHWKLDQVCNKEWHHYVLNVEFPTAALFVDGVSHEPFLVT
EDYPLHAAKVQTQLTVGACWQDNSGHDTDNETNADTLTGGSMHMSQFFRGSLAGLMIRSG
KLENKKVIDCLYTCKEGLDVQLPAEVADSVRVQFSPSQSSITLEGDDIESFDKVMQHISY
LNSRQFPTPGIRHLRISTTVKCFNEEACVAVPDVEGYVTVLQPDEPRISLSGIDHFARGA
AEFESVGGVTLFPELRIVSTITREVEPEAESEGDNDPTVQESVVSEEIMHNLDMCEVTAV
GEELDAEHESLGVDLTQVQQRGLEASSSNVGMIITGVNTMANYEQLLHLIRYRNWNTEAL
FDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPMDHANNAMAQPQFINPVQHASVDLSGH
NLVNSHQASVVPSAATIVIVVCVSFLVFMIVLGVFRIRVAHQRSLRDQEGGKDSEMDWDD
SALTITVNPMETYEDQHSSEEEEEDEESEDGEEDDITSAESESSEDEEGVGSEEQQGASR
QQQLEWDDSTLTY
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcgcgcgcacggaccccccgcagcgctgctgctgctcgcgctgctgggcgcg
ctccacgcggccaaagtgaacaagcacaagccctggatcgagactgcctaccacggtatc
gtgacggagaacgatgacaaggttctgttggacccaccgctcatagtgctggacaaagac
gcaccactccgctacgcagagaggtttgaggtgaccgtgaccagggcaggtgagatctgc
gggttccgggtccacgggcagaacgtgcccttcgaggttgtcctggtgaacggcagcaca
ggcgaaggcgccgtccgggccaaggagaagctggactgcgagctacagaaggagcacacg
ttcacgatccaagcgttcgactgcggcgagggtcccgatggcaccaacatgaagaaatcc
cacaaggccaccgtgcacatccaggtgaacgacgtgaacgagtactcgcccgccttcaaa
gagaagtcctacaaggcaacggtggtcgagggcaggaggtacgacagcatcctgagggtg
gaggctgtggacgccgactgctccttccagttcagccagatctgcagctacgagatcgtc
acccccgacgtgccctttaccatcgacaaggacggctacatcaaaaacacagagaagctg
agctacagcaaggagcgcgtgtacaaactgactgtgacggcctacgactgcggcaagaat
cgcgccaccgaggacgtcctcgtcaagattagcatcaagcccacctgcaagcccggctgg
caaggatggaacaagaggatggagtatgagccgggcaccggaagcctggcactctttccc
agcatgcacctggagacttgcgaggagccaatcacttccatccaggcgcgggtggagctg
gagacgagccacatcgggaaaggctgcgaccgagacacctactcggagaagtccctgcac
cgtctgtgcggggccacctccggcaccgcggagctcctgcccgcccccagcagctcggcc
cactggactgccagcctgcccactgacaacgggcacgacagcgaccaggtgttcgagttc
aacggcacccaggcggtgaaggtccccgagggtgtggtgagctccagtctagcccagccc
ttcaccatatctgtgtggatgaggcatggtcccggaggccaggacaaggagaccattctg
tgtaactcggataagacagagatgaatcgacaccactacgctctctacgtgcacaactgc
cgcctggtgttcctgctgcgccaggagccgtccgagtcggagagctacaagccggccgag
ttccactggaaactggaccaggtgtgcaacaaagagtggcaccactacgtgctgaatgtg
gagttcccgacggcggcgctcttcgtggacggtgtgagccacgagcccttcctggtgacc
gaggactaccccctgcatgccgccaaggtccagacgcagctcaccgtgggcgcctgctgg
caagacaattctggacacgatacagacaatgagacaaacgcagacactctcacagggggc
agcatgcacatgtcgcagttcttccgcggcagcctggccggcctcatgatccgcagcggg
aagctggagaacaagaaggtgatcgactgcctgtacacctgcaaggaaggcctggacgta
cagctgccggcggaggtggccgattcggtccgggtgcagttcagccccagccagtcctcc
ataaccctagagggcgatgacattgagagcttcgacaaggtcatgcagcacatctcctac
ctgaactcgcggcagttccccacgccgggaatccgccatctgcgaatctccaccacggtc
aagtgcttcaacgaagaggcgtgcgttgcagtgccagacgtcgagggttacgtgaccgtg
ctgcagccagacgagcccaggatcagcctgagtggcatcgaccactttgcccgcggtgcc
gccgagttcgagagcgtcggaggcgtgaccctctttcccgagctgcgcatcgtcagcacc
atcacccgcgaggtggagccggaggccgagagcgaaggcgacaacgaccccacggtacaa
gagtcggtggtgtcggaggagatcatgcacaacctggacatgtgcgaggtcacggccgtg
ggggaggagctggacgctgagcatgagagcctgggggtggacctgacacaggtccagcag
cgcggcctggaggcgagctcctccaacgtgggcatgatcatcacaggtgtgaacaccatg
gccaactacgagcagctcctgcacctgatccgctacaggaactggaacacggaggcgctc
ttcgacaggaagttcaaacttgtctgttccgagctcaacggacgctacgttagcaacgaa
ttcaaagtggaggtgaacgtgatccacacggccaacccgatggaccatgccaacaacgca
atggcgcagccacagttcatcaaccccgtgcagcacgcttcagtggacctctccggccac
aacctggtcaacagccaccaggcctcagtggtccctagcgccgccaccatcgtcatcgtc
gtgtgcgtgagcttcctggtgttcatgattgtgctcggagtgttccggatccgagttgct
caccagcgcagcctgcgagaccaggagggcggcaaggacagcgagatggactgggacgac
tctgcgctcaccatcaccgtgaaccccatggagacgtacgaggaccagcacagcagcgag
gaagaggaggaggacgaggagagcgaggacggcgaggaggacgatatcaccagcgccgag
tcggagagcagcgaggacgaggagggcgtcggctccgaggagcagcagggcgcgagccga
cagcagcagctggagtgggacgactccacgctcacctactga
DBGET
integrated database retrieval system