KEGG   Scleropages formosus (Asian bonytongue): 108923426
Entry
108923426         CDS       T04919                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
sfm  Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfm03009]
    108923426 (rrp9)
Ribosome biogenesis [BR:sfm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108923426 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IP5PC_F PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 WDR54 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_like Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 108923426
NCBI-ProteinID: XP_029103659
UniProt: A0A8C9V7P3
LinkDB
Position
22:23135932..23143742
AA seq 474 aa
MSSFFIKKKGNAKTDENAVAKKRKVAAASGKSRGALKKVLNEEISSESETEGPPVNKKSK
AEDEYLEETAQEKKLRLAKLYLDQLRAEEEKTAEDGSCETDVIAGRLQEEVLEQRGKLQR
LVAQDYLVPDAADLRLLRGHKLPVTCLVVSPDDKFIFSASKDCSIIKWDVESGRKLRTVP
GGRKGTEDRHVGHTAHILCMAISSDGKYLATGDMNKLIMIWEATTCKHLYKFTGHRDAVS
GLSFRKGTHDLYSASHDRSIKVWNVDENAYVETMFGHQDVITGLDSLSRERCVTAGGRDQ
TVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMISGADDGSLALWSVNKKKPLCTVKRAH
GCHGDEGLEQPYWISAVTALHNTDAVASGSHNSKVQLWRCGEGYRSLQPLFSIPVVGFVN
SLKFSNSGNFLVAGVGQEHRLGRWWRIKEAKNGLYIIPLKKRDSEPEQSSTNGE
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtcgtccttctttataaaaaagaaaggaaacgccaaaacggatgaaaatgctgtggct
aagaagaggaaggtggctgctgctagtggaaaaagcagaggggctctcaagaaggtgctc
aatgaagagatttccagcgagtctgagactgaaggccctccagtcaacaagaagagtaaa
gcagaggatgagtacttggaggaaacagcccaggagaagaagctccgcttggccaaactg
tacctggaccagctgagggcagaagaggaaaaaactgcagaagatggctcttgtgagact
gatgtgattgctggaagacttcaggaagaagtgcttgaacagagggggaaactccagcgc
ttggtcgcacaagattaccttgtcccagatgctgccgacttgcgcctcttaaggggccat
aagcttccagtgacctgccttgtcgtttctcccgatgacaagttcatcttctctgcctcc
aaggactgctccatcatcaagtgggacgtcgagagcggtcggaagttgcgcacggtgcct
ggagggaggaagggaactgaggatagacacgtgggccacactgctcacatcctgtgcatg
gcaatatcgtctgacggcaaatacctggccactggggacatgaacaagttgatcatgatt
tgggaggcaacgacttgtaaacatctgtacaagttcacggggcaccgagacgccgtgtcg
ggcctgtccttccggaagggaacgcacgacctgtacagcgcgtctcacgaccgctcgatc
aaggtgtggaacgtggacgagaacgcgtacgtggagaccatgtttggccaccaggatgtg
atcacgggcctggacagcttgagccgcgagcggtgcgtgaccgcaggggggagggaccag
accgttagagtgtggaagatcgcagaggagtcgcagctcgtctttcacggtcacgaaggt
tcgattgactgcatccagctcataaatgaggaacatatgatctcaggagctgatgatggg
tctttggccctgtggagcgtcaacaagaagaaacccctctgcacagtgaagcgagcccat
ggttgccatggcgatgagggcctcgagcagccctactggatctcggcagtgacggctctg
cacaataccgacgccgtggcttcaggttcccataattccaaggtgcagttgtggaggtgc
ggtgaagggtaccgcagtctgcagcccctcttcagcatccctgtggtgggttttgtgaat
agcctgaaattctcaaactctggaaattttctggtggctggagttggccaggagcacagg
ctcggcagatggtggagaattaaagaagcaaagaatggattgtacatcattcctctaaag
aagcgagactcagagccggagcagagtagcacgaatggagagtag

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