Scleropages formosus (Asian bonytongue): 108923684
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Entry
108923684 CDS
T04919
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03430
Mismatch repair
sfm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108923684 (mlh1)
03460 Fanconi anemia pathway
108923684 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108923684 (mlh1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108923684 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108923684
NCBI-ProteinID:
XP_018590115
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Position
18:complement(387598..394830)
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AA seq
724 aa
AA seq
DB search
MAGVIRRLDEAVVNRIAAGEVIQRPANAVKEMLENCLDAGSSSIQVTVKDGGLKLIQIQD
NGCGIRKEDMEIVCERFTTSKLRAFEDLSVITTYGFRGEALASISHVAHLTITTKTADGK
CAYRAAYSDGKLKASPKPCAGNQGTQITVEDLFYNVSTRRKALRSPSEEYSKIVEVVSRY
AIHNSGKSFAVKKQGDTTADLRTLLNASMVDNIRAVFGNAVSRELIEVGCEDQKLAFKLR
GFISNANYSVKKCIFLLFINHRLVDSSALKKAIETVYSAYLPKNTHPFLYLSLEISPQNV
DVNVHPTKHEVHFLHEDAIIESVQKHVEGKLLGSNSSRTYFTQTLLPGLPAPGGDVRPSS
SCLSDPSERPSAQHMVRTDCRAQKLDAFLQPGVGVSAPDAPDQQGRPREDSRGLDDARMP
TALEEEEEPKISEGVQKGSPVLPEVSSRKRPRVEPPQESPPPATPSRRNIRLTSVKELRV
EISDRAHAGLQEMLQNHTFVGCVTPQWALVQHQTKLYLLDVTRLSQELFYQIVIYDFGNF
GLLRLSQSPAPLYDLAMLALEMEESGWSEDDGPKEGLAQYIVDFLQKKAEMLEDYFSMEI
DQEGNLTGLPLLLDGYTPAMEGLPMFVLRLATEVNWDEEKECFRDFSRECSMFYSMRKQY
MPEDTLEAEPKEQGTTGPSWRWTVEHLLFKAFRTLLSPPGTSTQDGSVLQIANLPDLYKV
FERC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtgatccggcggctggacgaggcggtggtgaaccgcatcgcggcgggggaa
gtgatccaacggcccgccaacgccgtgaaggagatgctggaaaactgtctggacgcgggg
tccagcagcatccaagtcacggtgaaggacggaggactgaagctcatccagatccaggac
aatggctgtggcatcaggaaggaggacatggagatcgtgtgtgagaggttcaccacaagc
aaactgcgggccttcgaggacctcagcgtcatcaccacttacggcttccgcggagaggcc
cttgccagcatcagtcatgtggctcaccttaccataacaacgaaaacagctgatggaaaa
tgtgcctacagagccgcttactctgatgggaagctgaaggcttcccccaaaccgtgtgca
gggaaccagggcacccagattacggtggaggacctgttctacaacgtgtccacacgcagg
aaggccctgagaagccccagcgaggagtacagcaagatcgtggaggtggtcagcagatac
gccatccacaattcaggcaagagctttgcagtgaagaagcaaggggacaccacggcagac
ctgaggactcttcttaacgcctcgatggtggacaacatccgggccgtgttcggcaacgct
gtgagcagggagctcatcgaagtcggatgtgaggaccagaaactggctttcaaactgagg
ggcttcatctccaatgccaactattcggtgaagaagtgcatcttcctgctcttcatcaac
caccgcctggtcgattccagcgcactcaagaaggccatcgagactgtctactcggcgtac
ctccccaagaacacacaccccttcctctacctcagcctggagatcagtccgcagaatgtg
gacgtcaacgtccaccccacaaagcatgaggtgcacttcctgcacgaggatgccatcatc
gagagtgtccagaaacacgtggaggggaaactgcttggctccaactcctcgcgcacctac
ttcacacagaccctactcccgggacttcctgcccctgggggtgacgtgaggccatcctcc
agctgtctgtcggaccccagcgagcgcccctccgcccagcacatggtgcgcacagactgc
cgcgcacagaagctggacgcgtttctgcagcctggtgtcggcgtcagtgcccctgatgcc
ccagaccagcaggggcgccctcgcgaagactcacgtgggctggatgacgcaaggatgccg
acagccctcgaggaggaggaggagcccaaaatctcggagggcgtccaaaaagggagcccc
gtccttccggaagtctcctccaggaagcgcccacgcgtcgagcctccccaggagtctccg
cctcctgccacaccctccagacgcaacatccggctgacgagcgttaaggagctgcgcgta
gagatcagtgaccgtgcccatgcaggcctgcaggagatgctgcagaaccacacgtttgtg
ggctgtgtcacaccccagtgggccctggtgcagcaccagaccaaactgtacctgctggac
gtcaccaggctaagccaggagctcttctaccagattgtcatctacgacttcggcaacttt
gggctcttgagattatctcagagtccggctcctctctacgacctggccatgctggcgctg
gagatggaggagagtggctggtctgaggacgatggccccaaggaaggcctggcccagtac
atcgtggacttcctccagaagaaggcggagatgctagaggactacttctccatggagatc
gatcaggagggcaatctgacagggctgcccctgctcctggatggatacacgccagccatg
gagggcctccccatgttcgtgctgcgcttggccacagaggtgaactgggacgaggagaag
gagtgtttccgggacttcagccgcgagtgcagcatgttttattccatgaggaagcagtac
atgccagaggacacactggaagcggagcccaaggagcagggcaccacaggcccttcttgg
aggtggactgtggaacatctgctctttaaggccttcaggactctactgagccccccaggg
acctccacccaggacggcagtgtgctgcagatcgccaacctgcccgacctctacaaggtc
tttgagaggtgctga
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