Scleropages formosus (Asian bonytongue): 108923951
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Entry
108923951 CDS
T04919
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108923951 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108923951 (prpf3)
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108923951 (prpf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Glu_dehyd_C
ATP-synt_10
Motif
Other DBs
NCBI-GeneID:
108923951
NCBI-ProteinID:
XP_018590550
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Position
18:18035990..18044861
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AA seq
724 aa
AA seq
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MTSRFLGFRSSPVSNMSLPRREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKR
KTTDQLRPFLDESAGGFVERLFEALEESRSTRGNKSTGEKNRKRDLKDVFGEDSETGKDL
PVATEVAPKKKRVPRFAEVEEPEVLPGPPPESPGMLTKMQIKQMMEAATRQIEERKKQLS
FTTPNVPVAPPRLPVLTSPPSDPPASRLLPSVQPPLATSQSIPPSQAATFMNDAIEKARK
AAELQARIQSQLALKPGILGALGAGSHNLVALANLHAMGIAPPKVEAREVTKPTPLILDE
LGRTVDASGKEVELTHRMPTLKANIRAVKREQFRQQLKERPGDDLESTSYFDHRVSITPA
QRARKSFKFHEKGRFEKIAQRIRTKAQLEKLQMEIAQAAKKTGIHASTKLALIAPKKELG
EGEVPHIEWWDSYILPSNIEIFSSTVFDEVELFGVTNLVEHPAQMNPPVDTDKPVTLGVY
LTKKERKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAH
VRAQMAKRQKAHEEANAARKLTAEQRKEKKAKKLKEDLSHGVHIAVYRIRNLTNPAKKFK
VEANASQLYLTGTVVLHRDVNIVVVEGGPKAQKKFKKLMLSRIKWEEPTNSKRDDPEGSD
DEGMKKKNKCTLVWEGTAKERSFGEVKFKQCPTENMAREHFKKHGTEHYWDMALSQSVLE
SADD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcggtttttaggctttcgatcatcaccagtctccaacatgtctctgccaagg
cgggaagtggaggagttgcggccctgggtagagcgaacagtgaagaaggtcctgggcttc
tctgagcccacggttgtcacagcagcactgcactgtgtaggtaaaggcctggacaaaaga
aagaccacagatcagcttcggccgttccttgatgagtctgctggtggctttgtggagcga
ctgtttgaggctctggaggagagccgaagtacacgcggcaacaagagtactggagagaag
aaccgaaagagagacctgaaggatgtttttggggaggattctgaaactggaaaagaccta
ccggtagccactgaagtagcaccgaagaagaaaagagtaccacgtttcgcagaggtggaa
gagccagaagtgctaccgggccccccacctgaaagcccagggatgctcacaaagatgcag
ataaagcagatgatggaggcagcaaccaggcaaatcgaggaaaggaaaaagcaactcagc
ttcacaacaccaaatgttcctgttgctccgcctcgactgccagtcctgaccagtcctcca
tctgacccccctgcttctcgtctccttccttcggttcagccccccctggcaacttcccag
tccatccctccttcccaggcagccaccttcatgaatgatgccatcgaaaaggctcgcaag
gcagcagagcttcaggcccgcatccagtcacagctggctcttaagcctggcatcctgggt
gctcttggtgcaggttcccacaacttggttgcccttgcaaatcttcatgctatgggcatt
gcccctccgaaagtagaggctcgggaagtgacaaaaccaacaccgctcatcttggatgaa
cttggtaggactgttgatgccagtggcaaagaggtggaacttacacatcgtatgcctact
ctgaaagccaacatcagagcagtgaagagggaacagttccgacaacagttgaaggagcgt
ccgggagatgacctggagtctacttcctactttgatcatcgagtatcaattacgcctgcc
cagcgcgctcgcaagagcttcaagttccacgagaaaggccgtttcgagaagattgcccag
cgcatccgcaccaaggcacagctggaaaaactgcagatggagattgcccaggctgccaag
aagacaggcatccatgcttcaacaaagctggccttgattgctcccaagaaggagctgggg
gaaggtgaagtaccccacattgagtggtgggactcctacatactgccctccaacatcgaa
atcttctcttctacagtgtttgatgaggttgaactgtttggtgttacaaacttagtggaa
catccagctcagatgaaccctccagtggacacagacaagccagtcactttaggggtgtat
ctgactaagaaggagcggaagaaactcaggcggcagactcgcagggaggcccagaaagaa
ctgcaggagaaagtcagacttggactcatgcctccaccagaaccaaaagtgcgcatctct
aatctgatgagagtgttgggcacggaggctgtccaagaccccaccaaagtagaggcccat
gttagagcacaaatggccaaacgacagaaagcccatgaagaagcaaatgctgctcgcaaa
ctgactgcagagcagaggaaagagaagaaagcaaagaaactgaaggaagacttgagccac
ggggtacatatagctgtgtacagaataagaaacctgacaaacccagccaagaagttcaag
gtggaggcaaatgctagccaactatacctcacaggaacagtagtcctgcacagagatgtc
aacattgtggtggtggagggaggccccaaagcccaaaagaagttcaaaaagctcatgctc
agtagaattaagtgggaggaaccaaccaactccaaaagagatgacccagaaggatcagat
gatgaaggaatgaagaagaagaacaagtgcactctggtctgggagggcacagcaaaagag
cgcagcttcggggaggtgaagttcaagcagtgcccaacggagaacatggcaagagagcac
ttcaagaagcatggcacggagcactactgggacatggctctgagccagagtgttctggag
tctgcggacgactga
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