Scleropages formosus (Asian bonytongue): 108923980
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Entry
108923980 CDS
T04919
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
sfm04210
Apoptosis
sfm04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108923980 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108923980 (parp1)
04217 Necroptosis
108923980 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfm03032
]
108923980 (parp1)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108923980 (parp1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108923980 (parp1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108923980 (parp1)
DNA replication proteins [BR:
sfm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108923980 (parp1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108923980 (parp1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108923980 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
PADR1_Zn_ribbon
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
108923980
NCBI-ProteinID:
XP_018590573
LinkDB
All DBs
Position
1:34156522..34175709
Genome browser
AA seq
1013 aa
AA seq
DB search
MADAQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAGVQSPAEISGFSDLRWEDQEKVKKAIESGGASGGKGEQKGGVKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKAVDPEKPQLGLIDRWYHTACFVARREELAFKPEYTASQ
LKGFATLRAEDKEELKQRLPAVKTEGKRKTDETDGQGVSKKQKKEKEEKQEKQMKEQSQL
IWSIKDKLKKFCSINDMKELLIANGQEVPSGESNVVDSLADCMAFGALKPCEECQGQLVF
KSDAYYCTGNISAWTKCVVKTQAPNRKDWVTPKEFHELPFLKKFKFKRQDRVLPKLSSTV
PTNSAPTTSSSNSIPASTCQPVLSDKPLSGLKVLTVGKLTKNKDELKAAIEELGGKVTGT
ATKANLCVSSKKEVEKMSKKMEEVKDAGVRVVSEDFLTDVKSSGKDLQDLISLHGVSTWG
AEIKLEAPAPTSSAAMPCKSSGAGKSMGRVKEEEGGSKSKKMKLTVKGGAAVDPDSGLEN
CAHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNKL
EKFYDKNSAMDNFRSLYEDKTGNSWTSTNFTKYPNKFYPLEIDYGQDEDAVKRLTASAGT
KSELSKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLNEVQQAVS
DSVPESQILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVQMLDNLLDIEVAYSLLRGG
TEDNKKDPIDINYEKLKTKIEVVDRSSKEAEVILQYVKNTHAATHNTYTLEVEEIFKVVR
EGEYQRYRPFQDLHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHTSQSDPVGLILLGEVALGNTLELKKASHITKLPKGKHSVKGLGRTAPDPSAS
AMLDGVQVPLGKGINTNIEDTSLLYNEYIVYDVAQVNLKYLLKIRFNYQTSLW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgcaagacgacaagctttacaaagcggaatacgcaaaaagcggacgggca
tcttgcaagaagtgcaaggaaaatatagcgaaagactcgctgcgtatggcgataatggtg
cagtctcccatgtttgatggtaaagtcccccactggcaccacttctcctgcttctggctt
cgtgctggggtccagtcccccgctgaaatctccggcttttctgacctccgctgggaggac
caagaaaaggtcaaaaaggccattgagagtggaggtgcttcaggaggaaagggtgaacag
aagggaggagttaaaggagagaagacactgaatgactttgcagtggagtatgctaagtca
aacaggagcacctgcaagggatgtgaacagaaaattgagaaggaccagatccgtgtgtct
aagaaggctgtggacccagagaagccccagcttgggctcatagatcgctggtaccacaca
gcgtgctttgtggctcgacgcgaggagctggctttcaagccggaatacaccgcaagccaa
ctcaagggctttgctacgctcagggctgaggacaaggaggaactgaaacagaggttgcct
gctgtcaagaccgaggggaagagaaaaacagatgagactgatgggcaaggagtttctaaa
aaacagaaaaaagaaaaagaagagaaacaagagaaacaaatgaaggagcagagccagctg
atatggagcatcaaggacaagctgaagaagttctgctccattaatgacatgaaggaactg
ctcattgccaatggacaggaggtcccttcaggagaatcaaatgttgtggacagcttggca
gactgtatggcatttggggctctgaaaccatgtgaggaatgccagggtcagctggtattc
aagagtgatgcatactattgcactggaaacatctctgcttggaccaagtgtgtcgtcaaa
acccaggcaccaaaccgcaaggactgggtaacccccaaggaattccatgagctccctttc
ctgaagaagtttaagttcaaacgtcaggacagagtgcttcccaaattgtcatcaacagtt
ccgaccaattcagcgccaaccacaagttcttccaattccatccctgcatccacatgtcaa
cctgtgctatcagacaagcccctcagtggtctaaaggtgctgactgtggggaagctgacg
aagaacaaggacgagctaaaggcagccattgaagagctgggtggaaaggtcactgggact
gctaccaaagccaatctctgtgtcagctctaagaaggaggttgagaagatgagcaagaag
atggaagaggtgaaggatgctggggtgcgtgtggtgtcagaggacttccttacagatgta
aagtccagtggcaaggacctgcaggatctgatctctcttcatggtgtctccacctggggt
gctgagatcaaacttgaagcacctgctcccacctcttcggctgctatgccttgcaagtcc
agcggagctgggaagagtatgggcagagtaaaggaggaggaaggtggcagcaagagtaag
aaaatgaaactgacagttaaaggaggagcagctgtagatccagattctggtctggaaaac
tgtgcacatgtcttggatcagaatgggaagatcttcagcgccactcttggtctggtggat
atagtcagagggaccaattcttactacaaattgcagctcctggaggatgatgtgcagaag
cgttactgggtgttcagatcttggggccgtgtgggcaccaccattggaggaaacaaactg
gagaagttctatgacaagaactctgctatggacaatttccgcagtctctatgaggataaa
actggaaactcatggacctcaactaattttacaaagtatcccaacaagttctaccctcta
gagatcgactatggacaggatgaagacgctgtgaagaggctgacagcaagtgctggaaca
aagtctgagctgtcaaaacctgtacaagagctgatcaggatgatctttgatgtagagagc
atgaagaaagcaatggttgagtttgagattgacttgcagaagatgccccttggaaagctg
agcaagaggcagatccaaagtgcctactctctgctgaatgaagtgcagcaggcagtgtct
gacagtgtgcctgagtcccaaatcctggatctgtccaatcgcttttacaccctgatacct
catgactttgggatgaagaaaccaccactgttaaataaccttgactacattcaggctaaa
gtccagatgttggataacctgctggatattgaagtggcctacagccttcttcgtggtgga
acagaagacaataagaaggacccgattgacataaactatgagaaacttaaaaccaaaatt
gaggttgttgacagatcttctaaggaagccgaagtcatcttgcaatatgttaaaaataca
catgcagccacccataacacctatactcttgaagtagaagagatcttcaaggtggtgaga
gaaggcgagtaccagcgctacaggcccttccaggatctgcacaaccggcagctgctgtgg
catggctcacgtaccaccaactatgctggcattctgtctcagggtctacgtattgcaccc
cctgaggcccctgtgacaggttacatgttcgggaaaggcgtgtactttgctgacatggtg
tcaaaaagtgccaactactgccatacctctcagtccgaccctgtggggctcattctgttg
ggagaagttgccctcggcaacacgcttgaactaaagaaagcgtcacatattacaaaattg
ccaaagggtaaacacagcgtgaaaggtttaggaagaactgctcctgaccccagtgcctcc
gcgatgttagatggtgtgcaagtgcctctgggtaaaggcatcaacaccaatatcgaggac
actagtctgctgtacaatgaatatattgtgtatgatgttgcacaggtgaacctgaaatac
ttgttgaagatcagattcaactaccagacgtccctgtggtga
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