Scleropages formosus (Asian bonytongue): 108923998
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Entry
108923998 CDS
T04919
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108923998 (gen1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108923998 (gen1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
108923998
NCBI-ProteinID:
XP_018590607
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Position
1:34510660..34518756
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AA seq
920 aa
AA seq
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MGVNELWSILEPVCESVPLYSLAGKTLAVDLSLWVCEAQSVKEMVGRVTKPHLRNLFFRV
SALTLMGIKLIFVMEGEAPKIKAETMSKRTELRFGGAKKQAPKPSKCNRSRFKFILKECA
EMLDCLGVPWVTAKGEAEAMCAFLDSSGLVDGCITNDGDTFLYGAQTIYRNFNMNTKDPQ
VDCYKMKRVQSELHLDRETLVGVAVLLGCDYMPKGIPGVGKEQTLKLIETLKGKTLLQKF
SEWKDEGQVTQEKSVKKITHCPVCHHPGTSKFHEHHGCKLCNSKRFCEPQDYEYSCPCDW
HRAEQSRQISPVESSIKRKTLASEGFPFNEVINEFLVPKDSPVENVTRRKPNLFLMQNFA
LDKMDWPKHYTSEKVLALMTYTEMTNIKCGKKTSSYLQPIRICKSRVRNGVACFEIIWKK
PDHYVHVDSMAEGCQDVVTTVEEQCLFEAAYPDIVDQYMRDKAEAVENKSKQKKQRNKKK
DNKPEEADGVSELFVLMNLHSSSEDKISFTKGIKIMPPSDTTVTRKDLDCSQSSKQQQKL
PVGHTESGAPQGTPVEKDTQAESSASSAGAVTTADSPSVSVVIDELQLSEIDWDALSFTS
SPQVQKWEHTTTATQAHLSPGFSSSKEKIYTTLVTESDKDTLISDYVSYLNTLRPQNLQP
VRDLSDNSLRSRDLLKNATEHHMIALSPGILTTTSQPKTSAEPEFRNSKVDGVVTLSGQA
QRCIEKEFLSTSQKHGSKHSSVLKTSCLITHKAKDCSSGKPLPKYKFSRTKSSVLSQKSS
GDPGDGGCPANRKRQGVKSVCIVLSSSSDNSDAENMLVEQWSETSKSKTRQKSHMDYKRE
ITERVTTRKTCSSASELNPVPSDGNGKKSEVEENSVVFISEELDQGPVSASQMCASDEDD
SVNFANSPLPLAERLKLRYF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaatgagttatggtccatcttggagccagtgtgcgagtctgtgcccctctac
agccttgctggaaagacactggctgtggacctgagtctgtgggtctgtgaggcccagtct
gtgaaagagatggtagggcgagtcacaaaaccccacctccgaaacttgtttttcagagtt
tcagcacttacactaatggggatcaagctcatttttgtcatggagggtgaggcaccaaaa
ataaaagcagagactatgagcaaacgaactgagctgcgatttgggggtgccaagaagcag
gctcctaaaccatcaaaatgcaacagatcccgcttcaagttcattctcaaagagtgtgca
gaaatgctcgactgcttgggagttccgtgggtcactgcaaaaggagaggcagaagctatg
tgtgctttcctggattcttctggattagttgatgggtgcattacgaatgacggagatacc
ttcttgtacggagcacagactatttacagaaacttcaacatgaacaccaaggacccacaa
gtcgactgctataagatgaaaagagtccagtctgagcttcacctggatcgagagactctt
gtcggtgtagcagtactgctgggttgtgactatatgccaaagggtataccaggtgttgga
aaagagcaaactttgaagctaatagagacactaaaaggaaaaacacttttgcaaaagttt
agtgaatggaaagatgagggtcaggtaacacaggagaaaagtgtgaagaagattactcac
tgccctgtgtgccatcatccaggaacttctaaatttcatgagcaccatggctgtaagctg
tgtaacagcaaacggttttgtgaaccccaggactatgaatattcttgtccttgtgactgg
caccgggcagaacagtcaagacaaatcagtccagtagagtccagcattaaaaggaaaacc
ttagcaagtgagggattccctttcaatgaggtaattaatgagtttctagtgcctaaggat
agtccagttgaaaatgtgacaagaagaaaaccaaatctttttcttatgcagaattttgct
ttagacaaaatggattggccaaaacactacaccagtgaaaaggtgctggcactcatgacc
tacactgaaatgacgaacatcaaatgtggcaaaaagacatcctcatacttacaaccaata
cgaatttgtaagtcacgggtcaggaatggagttgcctgctttgaaataatctggaagaaa
ccagatcattatgtacatgttgattccatggcggaaggatgtcaggacgttgtgacgaca
gttgaagagcagtgtcttttcgaagctgcgtaccctgacattgtggaccaatacatgaga
gacaaggcagaagctgtggagaacaagtccaaacaaaagaaacagcggaacaagaaaaaa
gacaacaaaccagaggaagcagatggtgtttcagagctttttgttctaatgaacctgcac
agttcatctgaagacaaaataagttttacaaaaggaataaagataatgcccccatctgat
accactgtcaccaggaaagatctggattgttcccagtcctccaaacagcagcagaaactt
ccagtgggccacactgaatctggtgctccccagggaacaccagttgaaaaggacacacaa
gctgaatcttcagcctcctctgcaggcgctgtcacaacagcagattctccttcggtgtct
gtggtcattgacgaactacagttaagtgaaatcgactgggatgccttgtctttcacctcc
tctcctcaagtccagaaatgggagcatacaacaacagctactcaggctcatctgtcccca
ggtttcagcagcagtaaagagaaaatatacacaactttggtcacagaatcagacaaagat
acattaatttctgactacgtttcatacctgaatactctgagacctcaaaatttgcaacct
gtgagagatctctcagacaattctctaaggagcagagaccttctaaaaaatgctactgag
caccatatgatagcactaagtccaggcattctgacaaccacgagtcagccaaaaaccagt
gcagagcctgaattccgaaactctaaggtcgatggtgttgttaccctttctggtcaggcc
caaaggtgtattgaaaaagaatttcttagtacttcccaaaagcatggcagtaaacacagt
tcagtgctcaaaacctcctgcctcataactcataaagcaaaagactgttcaagtggcaaa
cctttgccaaaatataaattttcaagaacaaaaagctctgtgctgtctcaaaaaagcagt
ggggacccaggtgatggtggatgccctgcaaacaggaagaggcaaggtgtaaagagtgtc
tgtatcgttttatcctcttcaagtgataacagtgatgctgagaatatgctggttgagcaa
tggagtgagacgtccaagtccaaaactcggcagaagagtcacatggactataaacgtgag
ataactgagagggtgactacgcgtaaaacttgcagctcagcctctgagttgaatcctgta
ccttcagatggaaatggaaaaaagagtgaggttgaagagaatagcgttgtatttatttcc
gaagaacttgaccagggcccagtctctgcatctcagatgtgtgccagtgatgaagatgac
tctgtgaattttgccaacagcccactgccattagcagaaagactgaaactcagatatttt
taa
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