Scleropages formosus (Asian bonytongue): 108924270
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Entry
108924270 CDS
T04919
Name
(RefSeq) trichohyalin-like isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108924270
Membrane trafficking [BR:
sfm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108924270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
PH
SH3_2
Motif
Other DBs
NCBI-GeneID:
108924270
NCBI-ProteinID:
XP_018591039
UniProt:
A0A8C9R1F3
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All DBs
Position
18:complement(19167010..19179797)
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AA seq
1828 aa
AA seq
DB search
MATKRFSWMFFSSLQPSSQNPPESHRQCRDRSGREPSPRSETEVREDRERERDREGDWSR
QREMQRMKDRKREKEREIGQSYREERDCLKIPQQREKRYAKSEKEPLREGALSVWKERWR
EVGTTSREREDGKRTRKVTAREAEVGRRYVERPRGAEREDFERVNERDTLRYQKRDELKD
AHRYRENDRQRDWERDGLREEYRSNGRRLRERERDCDQRRERGSEFSPRYRKRDERVENE
QRSERERVRDRERERVRQLERESAYNTNEGKRLVEREREHVSDREGWERKQEGQRDTKSE
GDSEGETQRERVFEKQSLKKKHSRSEGDNEVEMIRERLRESDRLRENKEERKGDRYTDRY
RPKVTEDRARERYREREEVRDSERYRDRHEMRERDQETYKEKHRRRKEWREPETGREGPN
SQATSERLKHREEADVRERKKHKEERERCQLRERCREERPKSPRGIETENKEEIGTDIRG
GVQSYNHVYSEPEERGGKHRTGENAEETESSVRSDVERKKGRRVESSRGRKAEGERKQRR
EWTEDIESERVERLRHKRMWIEPWKTERREEASEGQEETCPEREGAIDQLSDRYAEKDLN
EGRATGLRREDIFMERGENRETGQGEGDTARDKDDEDEDDKWLNREFYEDRDMESENSEE
SERSWQEDEDGSVERDDEMDSTDENESEEKAGDKLRPSESDTESTMQEEEEERKLSIEDG
FVTVSSGGEEEQEEKFDDCKEFWESEGPNEDVQPAEGKSMGQMEAGGEEVGYEHHEEKDL
CETYSEQERNRENDSPSEGEQECIERRNLEEGVDVKTDIVEEETEREVVLDTEGDENERQ
DPKVTLFCVIGQTLPRSRTQGGPPDQKEMEESSEKEEESGTEIKESNTEQEEKEKDMGDS
PVYNMEHSDDSSGIHICDIAPKETDQYSEKDGSNTYSENADTEARGNITTGKSETETESL
CKNQHEAIRETEPYLETASEAGKEIEHEVTLTGDRKTRTESYSTEDRSHAGLDALTRVEE
QCKEEPCPELKPAGDVGTEIAGSSEDHALEQMELQKSGELYLEVQQQMDAWPTQDSFNSN
AKELSPAVTNQEVPEPGMHTDVLTDTNNGDQESPEAQGNTGRDTDTVESEREEKTQGLCE
RPAHVESYPNPCIIIETEGQTGAGRDPETTARESDTGAQAYQDDYPLTKTQLSKSNSCPS
PVHSPSKDHVNVSLEDKEGGRTVTERGATECTSSFRDLGKEVRSRRRGFRKTEKSGDVEE
GVGRDRRTRIFSISDDDDELSYSWSESELRKLTETIQRSKKRNSKFYNSQLYQQYSEVVQ
NQEILRQCRSDTLSSGSPLPSPPPARRPLPPLPAIPHPNSLIHSNSLSNISTLSAPVGSS
LRPPSPRLSISLSQSPTLWQDLPGVRNSRELSELNEDQRRLQEVRFEVVTSEASYCKSLD
IVVGHFLKSKQLGALLTAQDKTWLFSRLVDVRAVSHSFLLKLEEQVEKDIMHFTVCDIIM
HYCPRFRSVYVPYLTNQSYQDKTYQRLMAECPGFRRVVENLERNPVCQRLPLRSFLVLPF
QRITRLKLLVQNIVKRTAPNTMEDAQAIKALKLLEKIIQESNDSITQMKSIESLVSLSSK
VDFECRTLPLISQSRRLVREGAVAEMRDFALKETERNIYMHLFNDYLLLSLQKEGGRFTV
INYAPTTDIRVENCRVKLHSLQKNLFRLHLSPQRALLLCTESQSDKLRWISGLSRPHPEV
DYSAAQDVAQVQCIKAFVAQQPDEITLEKADVLLVHQQSSDGWVEGTRLSDRLRGWAPDS
HLETIVSERARKRNLLDTQKITNAAATY
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaacgcttcagctggatgttcttcagttccttacaaccctccagtcagaat
ccacctgagagccaccgtcaatgcagggatcgtagtgggcgagaacccagccctcgaagt
gagactgaagtgcgagaggacagagagagggagagagacagagagggggactggagcaga
cagcgagagatgcaaagaatgaaggatagaaagagggagaaagaaagagaaattgggcaa
agctatagagaggagagggattgcttgaaaataccgcaacaaagggagaaaaggtatgcg
aagtcagaaaaagagccattgagggaaggggccttatcagtatggaaagagaggtggcgt
gaagtgggtacaacaagcagggaaagagaagacggaaaaaggacgagaaaagttactgcc
agagaagcagaagtaggaaggagatacgttgagcgaccaaggggagcagaaagggaagac
tttgaaagagtcaatgaaagggatactctaagataccagaaaagagatgaattaaaagat
gcacatagatacagagagaatgacagacagagggactgggagagagatgggttgagggaa
gaatatagaagcaatggaaggagacttagagaacgagagagagattgcgaccaacggagg
gaaagagggagtgaattcagccctaggtacagaaaaagggatgaacgggtggaaaacgag
caaaggagtgaaagagagagggtcagagacagggagagagaaagagtaagacagctggaa
agagagtctgcgtataatacaaacgagggaaagagactcgttgaaagggaaagggaacat
gtttcagacagggaaggatgggaaaggaagcaagaagggcagagggacacgaaaagtgag
ggggatagtgaaggagagacacagagagagagggtctttgaaaagcagagtctgaaaaaa
aaacacagcagaagcgagggggacaatgaggttgagatgataagagagagactcagagag
agtgaccgactgagagagaataaagaggaaagaaagggggacaggtatacggataggtac
aggccaaaagttactgaggacagagcgagggagagatacagagagcgagaggaggtaaga
gacagtgagagatacagagacagacatgaaatgagagaaagggaccaggagacatacaaa
gaaaaacatagacgtaggaaggagtggagagagccagagacggggagagaaggaccaaat
tcacaggcaacaagtgagagactgaaacacagagaggaagctgatgtcagggagcgaaaa
aaacataaagaggaaagagagagatgccaacttcgggaaagatgcagagaagaacgtcca
aaaagtccgaggggcatagaaacagaaaacaaagaggagataggcactgacatcagaggt
ggagtccagagttacaatcatgtatacagtgagccagaagaaagaggagggaaacacagg
actggggagaatgccgaggagacagagagctcagtacggagtgacgtagagaggaagaag
gggaggagggtagagagcagcaggggaaggaaagcagagggggagaggaaacagcggagg
gagtggacagaagatatagagagtgagagggtagagagactaagacacaagaggatgtgg
atagaaccttggaagacagagagaagggaggaagcctcagaggggcaagaggagacatgc
cccgaaagagaaggagctatagaccaactgagcgataggtatgcagaaaaggacttaaat
gaaggtcgtgcaacagggctgagacgagaggacatatttatggaacggggggagaatcga
gaaacaggtcaaggagaaggagacacagcaagagacaaagacgatgaggatgaagatgac
aaatggctgaacagagaattttatgaagaccgagacatggagtctgagaacagcgaggaa
agcgaaagaagctggcaagaagatgaagacggttctgtggagagggatgatgagatggat
agcacagatgagaatgagagtgaggagaaggcaggtgataaactcaggccctccgagagt
gatacagaaagcactatgcaggaagaggaagaggaaagaaagttgtccattgaggacggc
tttgtaacagtctccagcggaggtgaggaagaacaggaagaaaagtttgatgactgcaaa
gaattttgggagagcgagggtcccaatgaagatgtgcaacctgctgaaggcaagagtatg
ggacagatggaggctggtggagaggaggtgggatatgaacatcatgaagagaaggactta
tgtgagacatacagtgagcaagagaggaacagggagaatgacagcccctctgagggagaa
caagaatgcattgaaagaagaaatttggaagagggtgtagatgtgaagacagatatagtg
gaagaagagacagagagggaagttgtgctggatacagagggagatgagaacgagagacaa
gatccaaaagtcactctcttctgtgtgattggacagacactgcctaggtcacgtactcag
ggaggtcctccggatcaaaaagagatggaagaaagcagtgagaaagaagaagaaagcggc
accgaaataaaggaatcaaatacagagcaagaagagaaggagaaagacatgggtgactca
cctgtctataacatggagcacagtgatgatagctctggaattcatatttgcgatattgca
cctaaagagactgatcagtattcagaaaaggatggaagtaatacatattctgaaaacgca
gacacggaagccagagggaatattacgactggaaaaagtgaaacagaaactgaaagttta
tgtaaaaaccaacatgaagcaatcagggagactgagccttatttggaaacagcatccgaa
gctggcaaagagattgagcatgaagtcacgcttacgggagacaggaagacacgcacagag
tcgtattcaacagaagatcggagtcatgcagggctggatgcgttgaccagagtggaagaa
caatgtaaggaagaaccttgccctgaactaaagcctgcaggggatgttgggactgaaatt
gcaggctcctctgaggatcacgctttggagcaaatggaattacagaaaagcggggaactg
tatttggaggtgcagcaacagatggatgcatggcctacccaagactcctttaacagtaat
gcgaaagagttgtctcccgccgtaacgaaccaggaagttccagaacctgggatgcacaca
gacgtgctgactgacaccaacaacggtgaccaggagtctccagaagcccaaggaaataca
gggagagataccgacacagtggaaagtgaaagagaggaaaagacgcaagggctatgtgag
agaccagcacacgtggagtcatacccaaacccttgcataattatagagacagaggggcag
acgggtgcaggtagagacccggagacaacggcaagagaaagcgatacaggcgcgcaggct
taccaggatgattaccctttgacaaaaacacagctctccaaatctaacagttgccctagc
cctgtccacagccccagcaaggaccatgttaatgtcagccttgaagacaaggaaggggga
aggacggtgacagagagaggagcgacagaatgcaccagcagttttcgagacctgggaaag
gaggtacggagcaggaggagggggttccgtaagacggagaagagtggagatgtggaggaa
ggtgtaggacgagatcggaggactagaattttcagcatatcagatgacgatgacgaactc
agttacagctggagcgaatcggagctcagaaaactaacagagaccattcaaagatcgaag
aagaggaactcaaagttttacaactcgcagctctaccaacagtacagcgaggtggttcag
aaccaggagattctgcgccagtgtcgctccgacacgctgtcctccggctcgccactccct
tcgcccccaccagctcgtcgtcctctgccaccccttcctgccatcccccaccctaactcc
ttgatccattccaactccttaagcaacatcagcaccctctcagcacctgtcggctcctct
ttgcgacccccttctccgcgactctcaatctccctttcccagtcccccactctctggcag
gatcttccaggggtcaggaacagcagagaactgagtgagctgaatgaagaccagagacgt
ttacaggaggtgaggtttgaagttgtgacttcagaagcatcctactgtaaaagtttagac
attgtggttggccactttctcaagtcaaagcagttaggagcactgctgacagcacaggac
aagacgtggctcttttccaggcttgtagatgtccgagctgttagtcacagtttcctgttg
aagctggaggagcaggtggagaaagacataatgcacttcaccgtatgtgacatcatcatg
cattactgccctcgattccgttcggtctacgtgccttacttgaccaatcaatcataccag
gacaagacgtaccaaagacttatggcagagtgtccagggttccggcgtgtggtggagaac
ctggagcgcaatccagtgtgccaacgtctacctctccgctctttccttgtcctccctttt
cagaggatcacacggctcaaacttcttgtgcagaacattgtgaagagaacagccccaaac
acaatggaggatgcccaggccatcaaggccctcaaattgctggagaagatcattcaagaa
agcaatgacagcatcacccagatgaaaagcatcgagtctttggtctcactgagttccaaa
gtggactttgagtgcaggacgcttcctctcatcagccagtcccgcaggctcgtgcgagaa
ggcgccgtggcagaaatgcgtgactttgctctaaaggagacagagaggaacatctatatg
cacctttttaatgactacctgctgctttctctccagaaagaaggcggcaggttcaccgtg
atcaactacgccccaacgacagacatccgggtcgagaactgccgcgtcaaactgcactcg
ctgcagaagaacctgttccgcctccacctgtcaccacagcgggccctgctgctctgcaca
gagtcacagagtgataaactgcggtggatatcaggtctgtcccgtcctcatcctgaggta
gactactcagcggctcaggatgttgctcaggttcagtgcatcaaagcatttgttgcccag
caaccagatgaaataacgctggagaaagctgatgtcctactggtgcaccagcagagtagt
gatggctgggttgagggaacaagattgtcggacaggctaagaggctgggccccggattca
catttggagactattgtcagcgaaagagcaagaaagcgcaacctgctggacacccagaaa
attacaaatgctgctgcaacttattaa
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integrated database retrieval system
