Scleropages formosus (Asian bonytongue): 108924384
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Entry
108924384 CDS
T04919
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108924384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108924384
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108924384
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
BUD22
NPR3
DUF3043
Vfa1
ADI
DUF2126
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
108924384
NCBI-ProteinID:
XP_029115118
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All DBs
Position
16:3959308..>3962777
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AA seq
665 aa
AA seq
DB search
MPSLVNTHHTHLVPPQIILPEMDSDEQEDSDSRKGCCPPGPRALFNMNNSNNNEEEEKRK
NKKEKKEKKEKKEKKKEKKEKKKDKEKEKEEREKEKEKEKEKEKEKEKKDEPKEVFVINP
GDNIYYQWLFVITIPVMYNWTVIIARACFEELQHKYLVMWFFLDYISDIIYLGDMMFRSR
TGFLEQGLLVKDEKKLREKYVQSFQFRLDAVSMLPTDILYFLLGLDYPEIRINKLLRVNR
MFEFFQQSETKTAYPNIFRISTLVMYIVIICHWNACLFYSFSKSIGFGSDTWVYPDITVP
EYGELLRKYSYSLYWSTMTLTTIGETPPPILDSEFLFVVVDFLVGVLIFATIVGNVGSMI
MNMNAARAEFQHRVDCIKQYMHVRKVSKDLEDRVIKWFDYLWNNKKAADEKHVLRYLPDK
LKAEIAINVHLDTLKKVRIFQDCEAGLLIELVLKLRPQVFSPGDYICRKGDIGREMYIIK
DGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLYCLSKDD
LMEALTEYPEAKGMLEEKGRQILMKDGLIDMDPSKLMPDAKDMEDKVNRMYATLELMQTK
LKRLMGQYDSTYQTMRDRVRLMEKYAGETWEEDSEEEEKKEGMEEGEKAEEKKEGDDGGE
KEEEK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgctggtgaacacccaccacactcacctggtccctccgcaaataatcctgcca
gagatggacagcgatgagcaggaggactccgacagcaggaaaggatgctgtccacctggt
cccagggccctgtttaatatgaacaacagcaacaataacgaggaagaagaaaagagaaag
aataaaaaagagaagaaagagaagaaggagaagaaggagaaaaaaaaggagaagaaagaa
aaaaagaaagacaaagagaaggaaaaagaggaacgggagaaagaaaaggagaaggagaaa
gaaaaggagaaggagaaagaaaaaaaggatgagcccaaggaagtgtttgtcatcaaccca
ggagacaacatctactaccagtggctgttcgtcatcaccatcccggtcatgtacaactgg
accgtcatcatcgccagagcctgctttgaagaattgcaacacaagtacctggtcatgtgg
ttcttcctggactacatatcagacatcatttacctgggcgacatgatgttcaggtcaagg
acaggcttcctggagcaaggcttgctggtcaaagatgagaagaagctcagggagaaatac
gtccaaagttttcagttcagattagacgccgtgtccatgttgcccactgacatcttatac
ttccttctgggtctcgactacccggaaatccgcatcaacaagctacttcgtgtaaaccga
atgtttgagttcttccaacagtccgagaccaagactgcctaccccaacatcttccgcatt
tccaccctcgtcatgtacatcgtgatcatctgccactggaatgcgtgtctcttctactcg
ttctcaaagtccattgggtttggatcggacacctgggtgtacccagacatcacagtgcca
gagtatggagaactgctcaggaagtactcttatagcctctactggtccaccatgactttg
accaccatcggtgaaactcctcccccaatcctggactcagaatttctctttgtggtagtt
gacttcttggtgggcgtcttgatcttcgccaccattgtcggtaacgtgggttccatgatc
atgaacatgaacgctgccagggcagagtttcaacacagggtggattgcatcaagcagtac
atgcacgtccggaaggtcagcaaggacctggaggacagggtcatcaagtggtttgactac
ctttggaacaacaagaaggcagccgacgagaagcacgtgctgaggtaccttcctgacaag
ttgaaggccgagattgcgatcaatgtccacttggacacgctgaagaaggtgcgcatcttc
caggactgcgaggcaggtttgctcattgagctggtgctcaagctcaggccacaggtcttt
agccccggggactacatctgccgcaagggtgacattgggagggagatgtacatcatcaag
gatgggaagctggcggtggttgctgatgacggcatcacccagtttgtggtcctcagcgat
ggaagctactttggtgagatcagcatcctcaacatcaagggtagcaaggcaggcaaccgc
cgcacagccaacattcgcagcatcggctactccgacctctactgtctctccaaggacgac
ctgatggaggcgctcaccgagtacccggaggccaagggcatgctggaggaaaagggaagg
cagatccttatgaaagatggcttgattgacatggacccatctaagctgatgcccgatgcc
aaggacatggaggacaaggtgaaccggatgtatgccaccttggagctcatgcagaccaag
ttgaagcgcctgatgggccaatatgattccacgtaccagacgatgcgggaccgtgtccgt
ctcatggaaaagtacgctggagagacgtgggaggaggactctgaggaagaggagaagaaa
gaagggatggaagaaggagagaaggctgaagagaagaaggaaggagacgatggaggggag
aaggaggaagagaag
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