Scleropages formosus (Asian bonytongue): 108924460
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Entry
108924460 CDS
T04919
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108924460 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108924460 (herc3)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108924460 (herc3)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
HECT type E3
108924460 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
108924460
NCBI-ProteinID:
XP_018591314
UniProt:
A0A8C9S7F4
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All DBs
Position
16:6057512..6077494
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AA seq
1049 aa
AA seq
DB search
MMLCWGSMATGQLGLGDVVGGLVSEPRRCTVFSGRGLKEVACGGQHSLFLLHDGSVYTCG
SNSCGQLGHEKPGGMPELVGALDAQKIVMVSCGWAHSVAVNKQGQVFAWGAGSGGQLGLG
TAEDTVRVPRLIKKLCEHRISQITCGNQHCIALSKDGQLFTWGQNSHGQLGLGKAQPSTL
SPQPLKSLSGIPLAHIAAGGDHSFALSLSGAVFGWGKNSCGQLGLNDEQDRAVPCHIKFL
RSQKVVYISCGDEHTAALTKDGGLFTFGDGSQGQLGHDSTNNEALPRRVLELMGSEVSQI
ACGRYHTLAFVPSSSTVYAFGCNTSGQLGTGSKGIAKSPLPIKGIFFSHRGGHSMSEFEH
YTVRKIHCGGDHNFLLYSNKENSIAPEDFRVINTTKSISIINYENLDTWRMRLTDSTDSS
ITNDIILLLSSTACWNASFLDQSDDGHFKTNPRIPGIDLNSVRLLFDTLMKPAFSKLLEQ
ATKSFESLLIPQLPCSPPDVEAMRIYLILFECPVLQDSKYFITLTIPLAMAILRLDANPS
KVLDNWWSLVDGSVFSRLVEIYKNTVVFLLTGGKALLIPVFLESYISATLRLLEKLHKVN
LKAQHVEYNQFYIPDITSLVDIQEDYLKWFLSKAEIKMRSPPVQSSVTLCAYPFILNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPLLARNPFLVLHVRRAHLVSDALRELAV
YSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQYSESNLLWFSDKC
FVEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVSPTLDDLKELSPTEGRSLQQL
LNYDGDDFEDTFCLNFAITREYYGLTEMKELVPGGENIVVQKSNREDFIKAYLNYIFDSS
VKELYGAFSSGFLKVCGGKVLSLFQPSELMAMVVGNNNYNWEEMEKNAIYKGEYSASHPT
VKIFWEVFHEFPLEKKKQFLLFLTGSDRIPIYGMESLRIIIQSTAAEEHYLPVAHTCYNL
LDMPCYQTKDTLRQRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggtagcatggccactggccagttgggcctgggcgacgttgtgggt
ggcttggtcagtgaaccccggagatgcaccgttttcagtggcaggggcctgaaggaggtg
gcctgtggggggcagcactcgctcttcctgctgcacgacggaagtgtgtatacctgtgga
tccaacagctgtggacagctggggcatgagaagccgggaggcatgccagagcttgtggga
gcactggatgcccagaagattgtcatggtgtcctgtggctgggcccactctgtggcggtt
aataagcagggtcaagtgtttgcctggggggcaggcagcgggggccagctgggcctgggc
actgctgaggatactgtcagagtccccaggttgattaaaaagctctgtgagcatcgaatt
tctcaaatcacatgtggtaatcaacactgcatagccctttctaaagatgggcagctcttc
acgtggggtcagaactcccatggacagcttggcctggggaaggcccaacccagcacactg
tctccgcaacccctgaaatccctgtcaggaatcccattggctcacattgctgcgggggga
gaccacagcttcgccttgtctctgtcgggggctgttttcggctggggcaagaatagctgc
gggcagttggggctgaacgatgaacaagatcgtgctgtgccctgtcatattaaatttcta
agatcacagaaagttgtgtacatcagctgtggagacgaacatactgctgccctgacgaag
gatggggggctcttcacatttggggatggctcgcagggacagctgggccacgactccacc
aacaacgaagccctccccagacgtgtgctggagcttatgggaagcgaggtgtcccagatt
gcctgtgggaggtaccacaccctggcatttgtaccttcctccagcacggtctatgcattc
ggctgtaacactagtggccagctgggcaccggtagtaagggcattgctaagagcccgttg
cccatcaaaggcatcttcttcagccatagaggaggccattccatgtcagaatttgaacat
tatactgttagaaaaattcattgtgggggagaccataacttcttattgtattcaaataag
gagaactccatcgcacctgaagactttcgtgttattaacaccacaaaaagcatctcgatc
attaattatgagaatctggacacttggcgaatgaggcttacagacagcacggattccagt
atcactaatgatataattcttcttctgtcatcaactgcatgttggaatgccagcttcctg
gaccaaagcgatgacggacactttaagaccaaccctaggatccctggcattgacctgaac
tctgtcaggctgctctttgatactctcatgaagcctgcattttccaaactgctggagcag
gccaccaagagctttgagagcctcctgatcccccagctgccttgctcgccgcccgacgtg
gaggccatgcgaatttatctgattctctttgaatgtcccgtgctccaagattcaaaatat
ttcatcacgctgaccatccctctggccatggctatattgcggctggatgccaaccccagc
aaagtgcttgacaactggtggtccttggtggatggcagcgttttctcccgcttggtggag
atatacaaaaacacggtggtgtttcttctaactggtggcaaagcacttctcatcccggta
ttccttgagagctatatcagtgctacattgcggcttctggagaagctgcacaaggtgaac
ctgaaagcccagcacgtggagtacaatcagttttacattcctgacatcacgagcctggtg
gacatccaggaagactacctcaaatggttcctgagtaaagctgaaattaaaatgaggtca
ccaccagtacagagctcggtgactctgtgtgcctacccatttattctcaatgcacaagcc
aagacaaccatgttgcagacagatgctgagctacagatgcagatggcagtgagtggcgcc
aatttgcacaacgtgttcatgctactgacgctggagccacttctggcacggaaccccttc
ctggtgctacacgtgcgccgtgcccacttggtgagcgatgccctgcgtgaactcgccgtc
tactccgacatcgacctcaagaagccgctcaaggtgatttttgatggagaggaggctgtg
gatgccggaggagtgaccaaggagttcttcctgctgctgctcaaagagctgatggacccg
gtatatggcatgttcacccagtactccgagtccaaccttctgtggttctctgacaagtgc
tttgtggagcacaactggttccacctaattgggatcatctgtggcctggccatctacaac
tccacagtggtagacctgcacttccctcttgtcctctacaagaagctgctagatgtgtcc
ccaactctggatgacctgaaggagctctcccccacagagggaaggagtctgcagcagctc
ctcaactatgatggggatgactttgaggataccttctgtctcaactttgcgatcacaagg
gagtactatggcctgaccgagatgaaggagctggtccctggtggagagaacatagttgtt
cagaagtccaacagggaagactttataaaggcctacctgaactacatattcgacagctcg
gtgaaggagctgtacggcgccttctccagcggcttcctcaaggtgtgcggaggcaaggtg
ctctccctcttccagccctcagagctcatggccatggtggtgggaaacaacaactacaac
tgggaggagatggagaagaatgccatttacaaaggggaatactcagcttcacaccctact
gtgaagatcttctgggaagtctttcacgaatttcccctggagaaaaagaagcagttctta
ctgttcctgacaggcagtgaccgcatcccaatctacggcatggagagccttcgcataatc
atccaatcgacggcggccgaggagcactacctgcccgtggcacacacctgctacaacctg
ctggacatgccctgctatcagaccaaagacacgctgcggcagcgcctcacacaagccgtg
gagcaatacgaaggcttcagcctggtgtga
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