Scleropages formosus (Asian bonytongue): 108924481
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Entry
108924481 CDS
T04919
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
108924481
Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
108924481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
108924481
NCBI-ProteinID:
XP_029114688
LinkDB
All DBs
Position
16:complement(9679718..9769397)
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AA seq
1648 aa
AA seq
DB search
MASPGLETEGNPSPPPPLHHHHHHQQQQHHHHQQQQQQHQHQHAESSPEPAFQEAQKWIE
AVTGRRFGDKDFRGGLENGILLCELLSSIKPGLVKKINRLPTPIAGLDNLTLFLRGCEEL
GLKGSQLFDPGDLQDTSIRANPKVSECSRKLKNVLITIYWLGKAANSCATYNGPTLDLKE
FEGLLSQMRKEAEDSESPKRSVRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRS
QQTPSPDVVIRGSSDGRGSDSESDAPHRKLPDVRKDDMLARRTSYNEPRSVMPFNQYLPN
KSNQSAYVPTPLRKKRAEREDGRKSWSTATSPIGGERPLSEAPPAPVCQACLEKGSQPPA
ILAETAARDDLASRRARANQRPPGSRQQRFVHFGPVTEIDQRCWEKLSIARLGEEDEGEG
LRAGEDNEAATLRRLLSAAPVATPTIGLGSQLTGRAASALSGGEEVPPLTPAELAQRENK
VLDEKLAQYSEQEEEEDTDREGKVPDLEKDDMLARRTGAFQKQAGGTTFNKFLPLPGSKL
HARKDIVPVSPKAKREAAGGSDVKKEPPCRELMPNSPKAGKEPSVARAELCSQEFQPKAN
AAAQPNYDTAVVVCVNVQSENEDEENEEEELLPDLEKDDMHARRTGMFQKGVGPAFNSFL
PMPGSLKYKATPVAGHVSTFSRPMEEGKVSTLESSRAGTSHSMELCREPNTAAMVTSPVT
WTPKGSPGMSRKLPQVANREEVDRGRRSASPSLDLKKDDTWACRTLASPKPSTPSPTHFQ
PMPAANEAGAVWTGAEGDKAQRRPSWLDEDLPPIFSHRATNVSDDPESVSMIDMRCEEEA
MLQPHSQTRHELMHNQYNKMREEEDHWQDDLARWKSRRRSASQDLIKKEEERKMMEKLMS
GDGNQSHRRRSIKTYKEIVEEKEKREQELHEAYRKARTPEEAAAILQRYALRFTISEAVL
ERLQIPKQPERVPLSEPSASSAPSQLPSTAPPSAGQDAGTMKYLRQQSVPVPKFTSTVET
MVGGVPEIQAQTQADTPDPAPTRTALPKTVPLLTPKPYTQPRSSQTGLKSVKADGMVRVN
GEAGETSGVTRDIMDQKRTEGASPVKSTVFLTPSLVETPDSPRKEPQELKGNNELIGAQE
GPTNKTPEAGHQESSSAVIPPVSAALDPAPVRPTYLPTSGLCTETTVHAAAPEEGEEEDE
RAAQQSPVTEDKQEKEAEDEAPTPLTDVAQSLETSDMSINTQLSSSSDTVQMGEDGELSI
LFAPRGAKAMPPSTQVACQSPGTELAYSADNARLRWEFFTLPDSPEKDPVSIPSPMLGLV
KRVDHWSWDPEEERKRQERWQQEQERMLQEKYQREQEKLKQEWEKAQREVEEEERRYHEE
ERRILEETVAPLTPRSSALPSPIRVDPPMPSNPQDAIVRSLADWERKQELLEEQRRAEDS
GHDTRAEHLAMGSTECLRPAESSTPQSLSQTEAVAETLQNGQRAPVDQGQTTVPQLQFIQ
EASWSSKPPQNKQPQQEEVWNKTASLDRNLSTQQAQSGRMKRSGSCENVGTNPSQSSTFS
SAIQSQSPNRSVSGKKLCSSCAHPLGKGAAMIIETLGLYFHIQCFKCGICKGQLGDTSTG
TDVRIRNGLLNCHECYMKSRAAGQPTTL
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctggtttagaaactgaagggaatccttctcctcctcctcctcttcatcat
catcatcatcatcagcagcagcagcatcatcatcatcagcagcagcagcagcagcatcag
catcagcacgccgaatcgtccccggagcccgcttttcaggaggcgcagaaatggatcgag
gcggtgacgggccgacgcttcggggacaaggacttccgcggtggcctggagaatgggatc
ctgctgtgcgaactgctgagttccatcaagccgggactggtgaagaagatcaacaggctt
cccacacccatagccggcctggacaacctgaccctctttctcaggggctgtgaagaactg
gggctaaaggggtcacagctctttgaccccggagatctgcaggacacctccatacgcgcc
aaccccaaggtctctgagtgcagtagaaagctgaagaatgtcctgatcaccatatactgg
ctggggaaggcggccaacagctgcgccacctacaacgggcccaccctggacctgaaggag
tttgaggggttgctgtcgcagatgaggaaggaggccgaggattcggagagccccaagcgg
agcgtgagggacagcggctacatcgactgctgggactctgaacgcagcgactcgctctca
cctccacgccacggccgcgacgactccttcgacagtctggactcctttggctcccgctcg
cagcagaccccctcccccgacgtggtgatccgcggcagcagcgatggtcgtggcagcgac
tctgagtccgacgccccccacaggaaactgccggatgtgcgcaaggacgacatgctggca
cgccgtacgtcctacaatgagccacgcagcgtgatgcccttcaaccagtacttgcccaac
aagagcaaccagagcgcctatgtgccgacccctctgcgcaagaagagggcggagcgtgag
gatggccgcaagagctggagcaccgccacttcaccaataggaggggagcgccccttgagc
gaggcccccccggcacctgtgtgccaggcctgcctagaaaagggctcccagccccctgcc
atcctggcagagacggcggcacgggacgaccttgccagccggcgtgcccgcgccaaccag
cgcccgcctgggagcaggcagcagcgtttcgtgcactttgggcctgtcaccgagatcgac
cagcggtgctgggagaagttgagcatagctcgtctgggggaggaggacgagggggagggg
ctaagggccggggaggacaacgaggccgccactctccgccgtcttctgtctgccgccccc
gtggccacgcccaccatcggcctgggctcccagctcaccgggcgggctgccagtgccctg
agtggtggagaggaagtgccacctctgaccccagcagagctggcacagagggagaacaag
gtgctggatgagaagttggcccagtacagtgagcaagaagaagaggaggacacggacagg
gaggggaaggtccctgaccttgaaaaggatgacatgctggcccgcagaaccggggcattc
cagaaacaggcgggtggcaccacattcaacaagttcctccctctgcccgggtccaaacta
catgccagaaaggacattgtccctgtgagccccaaagcaaaaagagaggctgcaggaggt
tctgatgttaagaaggagcctccctgcagggagctgatgcccaacagccccaaagcgggg
aaggagccaagtgttgccagagcagagctctgctctcaggagtttcaaccaaaagccaat
gcagctgcccagccgaactatgacacagcagtggttgtctgtgtgaatgtccagtccgaa
aatgaggatgaggagaatgaagaagaggagctgttaccagatctggagaaagatgacatg
catgcacgtaggactggcatgtttcagaagggggttggaccagcctttaacagttttctt
ccaatgcctggatctcttaaatacaaagccacacctgttgctggccatgtgtctactttc
agcaggccaatggaagaagggaaggtgtcaaccctcgaaagcagtagagcaggcacgtcc
cattcgatggagttatgccgagaacctaacaccgctgcgatggtgacaagccctgtgacc
tggacccccaagggcagccccggaatgtccagaaagctccctcaggtggccaacagggag
gaggtggacagaggcaggagatcggcgtccccctcgctcgacctgaagaaagatgacaca
tgggcctgccgcaccctggcttcgcccaaacccagcacccccagccccacgcacttccag
cccatgccggcagccaacgaggctggggcagtgtggaccggggcagagggggacaaagcg
caaagaaggccctcctggttagatgaagatctacccccaatattcagccacagagctact
aatgtgtcagatgacccagagagcgtgagcatgatcgacatgcggtgcgaggaggaggcc
atgctgcagccgcacagccagacacgccatgagcttatgcataaccagtacaacaagatg
cgggaggaggaggatcactggcaggacgacttggcccgctggaaaagccgcaggaggagt
gcttcccaggacctgatcaagaaggaggaggagaggaagatgatggagaagctgatgagt
ggagacgggaaccaatcgcacaggagaaggagcatcaagacttacaaggagattgtggag
gagaaggaaaagcgcgagcaggagctgcacgaggcatatcgaaaggcacgtaccccggag
gaggcggctgctatactgcagcgctatgccttgcgcttcaccatcagcgaggccgtgctg
gaacggctgcagatacccaagcagccggaacgcgtcccgctctccgagccctccgcttcc
tccgccccctcgcagctcccctccaccgctcctccatctgcgggccaggacgctggtacc
atgaagtacctgcggcagcagtctgtgcccgtgcccaagtttacctccacggtggagacc
atggtgggcggagtcccagaaatccaggcccagacacaggctgataccccagatcctgct
cccacccgcaccgcactgccgaagacagtgccacttctgactcccaaaccctacacccag
cccaggagttctcaaacagggcttaaatcagtgaaggctgatggaatggtgcgtgtaaac
ggagaggcgggggaaacgtcgggagtaacgagggacatcatggaccagaaaaggactgag
ggagcatccccggtaaagtccacggttttcctgacaccttccctagttgagactccggac
agccccagaaaagagccacaggagctgaagggaaataatgagctcattggggcccaagag
ggccccacaaacaaaaccccagaggcggggcaccaggaaagcagcagcgcagtgatcccc
ccagtgtccgcagcactggaccctgctcctgtccgacccacctacctgcctacgagtggg
ctctgcacagagaccacagttcatgctgcagctcctgaggagggagaagaggaggacgag
agagctgctcaacagtcaccagtaacagaagacaagcaagaaaaggaagcagaggatgaa
gccccgaccccattgacagatgtggcccagagcctggagacctctgacatgtccatcaac
acacagcttagtagctcatcagacactgtccagatgggagaagacggagagctgtccatc
ctatttgctccaaggggagccaaagcgatgccacccagcacccaggtggcctgccaatca
cctgggacagagttggcttacagtgccgataacgctaggttacgctgggagttcttcacc
ctgccagattctccagagaaggatcctgtgagtatcccctccccaatgttgggtctggtc
aagcgggtcgaccactggtcttgggacccagaggaggagcgcaagcgtcaggaacgatgg
cagcaggagcaggagcgcatgcttcaggagaagtaccagcgtgagcaggagaagctgaag
caggagtgggagaaagcgcagagggaggtggaggaggaggagaggaggtaccatgaagag
gagaggagaatcctggaggaaaccgtggccccactgaccccccgttcatccgctttgccc
tcccccatccgcgttgacccgcccatgccctccaacccacaggatgccatcgtcaggtcg
ctggctgactgggagcgcaagcaggagctgctggaggagcagagaagggcggaggacagc
gggcacgacacgagagctgaacacctggccatggggagcacagagtgtttgcgccccgca
gaaagctcaaccccacaaagcttgagccagacagaagcagttgcagagactctgcagaat
ggccaaagagccccagtggaccagggccagaccaccgtgcctcagcttcagttcatccaa
gaggcatcatggagcagcaagccgccccagaacaagcagccccagcaggaggaggtgtgg
aataagacagcctcgctggaccgaaacttgagtacccagcaggcacagtctgggagaatg
aaacggtctggatcgtgtgaaaatgtagggacaaacccatctcagtcatccacattttca
tctgccatccagtcccagtctcccaacaggtcagtgagtggaaagaagctgtgctccagc
tgtgcccaccccttaggcaagggagccgccatgatcatcgaaactcttggcctctatttc
cacattcagtgcttcaagtgtggcatctgtaagggacagctgggggacaccagcaccggc
acggacgtgaggatccgaaacggactcctcaactgtcacgagtgctacatgaaatcgcgc
gctgctggtcagcccaccactttgtga
DBGET
integrated database retrieval system
