Scleropages formosus (Asian bonytongue): 108924818
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Entry
108924818 CDS
T04919
Name
(RefSeq) zinc finger BED domain-containing protein 1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108924818
04121 Ubiquitin system [BR:
sfm04121
]
108924818
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108924818
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108924818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF7477
Motif
Other DBs
NCBI-GeneID:
108924818
NCBI-ProteinID:
XP_018591921
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All DBs
Position
3:1488003..1493250
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AA seq
934 aa
AA seq
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METLASRVARMNNAMTWWSSLPSSSMNFPGYSLSSSVGPTLKRRIERLSGGMGRPLYCAA
VDRRKSKVWNYYTQLSETHVECNVCKKQLSFHNSTTTMREHLVRKHSIRDNGPHPTVNTM
LASASATLLPPMPQPSYPGNSASTPTTATACILQPVVSLVVKEEVQDADISPESGDAKRA
RTTCGTNSAGAGASSTNALSSQDQDVAQSSLSGFVYNESSSTGNGGGGGSTRSCSNKRAA
LLTELILEMVFRDLQPLSLMEERGFRMLLSCLEPHYHVPSPSQLGSLLWHRYHVLKQHLE
QHLQASLAPGCLALCTERWRSVAGCGVGGSGGQLYSTVSAHFVDKDWRLARCVLETRPIR
EFGDEAAGRSGIQLGDMLRAVLSEFHLPESFVFCVVHDTPWVMDARGAGQPDQEQSYQQQ
EKRPDVLSRRVGPEQTSVQSLPAGWVALHCAGDALKLCVQEGLWDEPVRQALAAARGIVL
HFQHDANAAAALSQKAEAANKAGARLLLDDPGRWATAIDMCESLLELKWVVSSVLEEQKA
TPNLADHQWRLLQELVPILRTVRIAAAFLSEDTNAPISALMPCLHGVSRLLGQRMAESGC
AVAQGVMQRLRAGMEKRWRLGEEDVLQDSPAVLSSFLDPRFKELRFLSPHARSKLHDKVK
ELLSAQAYTEDGESERVEDEEDEDDEVREGPGAELALGLADPLSAPAEATPDSPVSCGSA
EEGDIIVLKQQQSVTPGCLSAPKQSAELALGGGTANRTTGQSKGDTQAVPRERVSPVPQS
MYDILLGEDPTERMPEIHQQLENYIAEPLCKRSLSPLNWWRAKEHRFPAVARLARKYLAI
PATAVPADRAFAPRETSVAQRRATMGPQHLDHILFLHQNCNYMEHLKGGHGGGRDGSGGG
ANSSASHGSQQSRETLYQSLVSYENKAWVTSDEL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctcgcgagccgagtcgcgcgcatgaataatgcaatgacctggtggtcttcc
ctcccttcatcctcaatgaatttcccaggctactcgctgtccagcagcgtcgggccgacc
ctcaagaggcgaatcgagcggctttcggggggaatgggacgcccgctgtactgtgccgca
gtcgaccggcgcaagtcaaaggtgtggaactactacacgcagctgagcgagacccacgtg
gaatgcaacgtgtgcaaaaagcagctgtccttccacaacagcaccaccaccatgagggag
cacctcgtccgtaagcacagcatccgggacaacgggccccatcccaccgtcaacaccatg
cttgcctccgcttcggcgacgctgctcccgcccatgccccagccgagctaccccggcaac
agcgcatcgacgcccaccacggcgacagcctgcatactgcagcccgtggtttccctagtg
gtcaaggaggaggtgcaggacgcggacatctcgcccgagtccggggacgccaaacgggcc
cggaccacatgtgggaccaatagtgctggagccggtgcttcgagcacaaatgcgctgtcg
agtcaagaccaggatgtggcgcagtcctcgctctctggatttgtgtacaatgagagcagc
agcactgggaacggcggcggtggcggcagcacgaggagctgcagtaacaagagggctgcc
cttctcaccgaactcattttggagatggtgttcagagatctgcagccgctctcgctcatg
gaggagcgaggtttccggatgctcttgagctgcttagagccacattatcatgtgccttcg
ccttctcagctcggcagcctgctgtggcaccgttaccatgtcctgaagcagcacctggag
caacacctgcaagcgagcctggcaccgggctgcctagcgctgtgcaccgaacggtggcgc
tctgtggcaggctgcggggtgggtggcagcggcggccagctatactctactgtgagcgcg
cattttgtcgacaaggactggcgcctggctcgctgcgtgctcgaaacccgtcccatacgg
gagtttggcgatgaagctgcgggcagaagtggtatccagctgggtgacatgctgagggcg
gttctgtctgaattccatctcccagaaagctttgtgttctgtgtggtgcatgacacgccc
tgggtcatggatgcccggggggcaggtcagcctgatcaggagcaaagttaccagcaacag
gaaaagcgaccggatgtgctgtcccgcagggtcggccctgagcaaacatctgtccagagt
ctccccgcaggctgggtggcgctgcactgcgccggggacgcgctcaaactctgcgttcag
gaggggctctgggacgagcctgtgagacaggcgttggccgctgctcgcgggattgtgttg
cacttccagcatgacgcaaacgccgcagcggcgttgagccaaaaagcggaggccgccaac
aaggctggggcgcggctgcttctggatgaccccggacgctgggctactgctatagacatg
tgcgagagccttctagagctcaagtgggttgtgagctcagtgctggaggagcagaaggcc
acgcccaacctggctgaccaccagtggcgccttctgcaggagctggtgcccatattgagg
acggtgcgcattgccgccgccttcctgagtgaggatactaatgcgcccatttccgccctc
atgccctgccttcacggcgtctctcgtctcctcgggcaacgcatggcggagagcggctgt
gccgtggctcagggcgtgatgcagcggctgcgtgccggaatggagaagcgctggagactt
ggcgaggaggacgtcctgcaggacagccctgctgtgctctcttcctttctggaccccagg
ttcaaggagctgcgctttctcagcccgcacgcgcggagcaaactacatgacaaggtcaaa
gagctgctgtcggctcaggcgtacactgaagacggggaaagtgagagggtcgaagacgag
gaggacgaggatgacgaggtgagggagggcccgggggccgagctggcgctgggactggcc
gatcccctttcggcgccggccgaagccacgccggactcgcccgtgtcctgcggctcggcc
gaagaaggcgacattatcgtgctgaagcagcaacagagcgtgactccgggctgcctgagc
gctccaaagcagagtgctgagctcgcgctgggaggcggcaccgctaaccggacgaccggc
cagtcgaagggcgacacccaagcagtgcctcgcgagcgcgtcagtcccgtgcctcagagt
atgtacgacatcctgctgggcgaggaccccaccgagagaatgcccgagatacaccagcag
ctcgagaactacattgcggagccgctgtgcaagcggagcctgtcaccactcaactggtgg
cgagcgaaggagcaccggttccccgccgtagcaagactggcgcgcaagtacctggccatt
cctgctacggccgtgccggcggacagggccttcgctcccagggagacctctgtcgcgcag
cgccgggccacaatggggccacagcacctggaccacattcttttcctgcatcagaactgc
aattacatggagcacctgaagggtgggcacgggggcgggcgggatggcagtgggggcgga
gcaaacagcagcgccagccacggcagccagcagagccgcgagaccctgtatcagtcgctc
gtgtcctacgaaaacaaggcgtgggtgacaagtgacgagctctga
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