Scleropages formosus (Asian bonytongue): 108925034
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Entry
108925034 CDS
T04919
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108925034 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfm03009
]
108925034 (utp15)
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108925034 (utp15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
PAC11
Beta-prop_SPT8
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_ACSF4
WDR90_beta-prop_4th
DSE1_N
Beta-prop_EIPR1
Beta-prop_IFT122_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR41
TRM82_WD
Beta-prop_WDR19_1st
Beta-prop_At4g14310
Beta-prop_LRRK2
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Utp8_C
Motif
Other DBs
NCBI-GeneID:
108925034
NCBI-ProteinID:
XP_018592258
UniProt:
A0A8C9S4P0
LinkDB
All DBs
Position
6:17680481..17689674
Genome browser
AA seq
527 aa
AA seq
DB search
MASYKATRIPSFPRLGEKVTQDTLYWRNYKTPVQIKEFGAVTKIDFSPLSPHNYAVTAST
RIHIYGPYSQEPVKSFTRFKDTAYSGTFRSDGQLLVAGSEEALIRLFDVSGRVALREYTG
HSKAVHFTDFSADRFHILSGSDDYTCRLWDIPSSAEVSRYSEHTDYVRCGTPSRLNPDVF
ITGSYDHTVKVFDSRKERSVMTMDHGQPVESVLLFPSEGLLVSAGGRYVKVWDMLKGGQV
LVSLKNHHKTVTCLCMSSTGQRLLSGSLDRHVKVYSTTTYKVVHNFDYAASILSIALAPN
DDSIIAGMTNGVLSVKHKKHPEDRKMVGGTSRHRPAYRVFVKGKNYMPKQDDFLVRKREK
AHLKQYDKELKRFQVSKALDSVLKPHVRLKTPEVTVAVIQELNRRGTLKNALAGRDEKGL
SILLSFLIRNVVDSRFAPILLTVAEMVLDIYMKVVGQSAVVDKQILKLQELVEKEIDYQQ
ELMEVLGMMDTLFATMTAKKEAAALQSRAANGLVEVRGGQDQMVKAT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctacaaagcaacgcggatcccgagtttccccaggctgggagagaaggtcacc
caggacaccctatactggaggaactacaagactccggtgcagattaaggaatttggggca
gtgactaaaatagacttctctcctctgtcgccgcacaattacgctgtgacggcatcgaca
cggatccacatttacggaccctattctcaggaacccgtgaagagcttcacgcggttcaaa
gacacggcgtacagcggcactttccgctcggacggccagctgctggtggcaggcagcgag
gaggcgctcatccgcctctttgacgttagcggtcgagttgcgctcagggaatacactggg
cacagcaaggccgtgcatttcacagacttctccgcagaccgctttcatatattgtctggg
tcagacgactacacgtgccgcctgtgggacatccccagttctgccgaagtctcccgctac
agcgaacacacggattatgttcggtgtggcactccaagcaggctaaatccagatgtcttc
atcactggctcctacgatcacacagtgaaggtgtttgattcccggaaggagaggagtgtg
atgaccatggaccatgggcagccggtggagagcgtgcttctcttcccttctgaggggctc
ctcgtgtctgcaggtgggcgctatgtcaaggtatgggacatgctgaaagggggacaggtg
ctggtctctctgaagaaccatcacaagacagtgacgtgtttatgcatgagcagcacgggt
cagaggctgctgtcagggtcactggacaggcatgtgaaggtttacagcacaacaacttac
aaagttgttcataattttgactacgctgcatccattttgagtatcgcattggcgcctaat
gacgactcaatcatagctgggatgactaatggggtgctgagcgtcaaacacaagaaacac
ccagaagaccggaaaatggtcggcggtacgagcagacatcggccagcgtaccgtgtcttt
gttaaggggaagaactacatgccaaaacaggatgactttttggtccgaaaacgtgagaaa
gcccacttgaaacagtacgacaaagagttaaagaggttccaggtgtccaaagctttggac
tcggtcctgaagcctcatgtgcgactgaagacacccgaggtgacggtggctgtgatacag
gagctgaaccgcaggggaaccctgaagaatgcccttgccggacgggatgagaaaggcctt
agcatcctactcagcttcctcattaggaatgtagttgattccagatttgcccctattttg
ctcactgttgcagagatggttttggacatctacatgaaggtggtgggacagtcggctgtg
gtggacaagcagatcctgaagctgcaggagcttgtcgagaaggagatcgactaccagcag
gagctgatggaggtgctcggcatgatggacaccctgtttgccaccatgacggccaagaaa
gaagcagcagccctgcagagccgagcagccaatggattggtggaggtcagaggtggacag
gaccagatggtgaaggcaacctga
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