Scleropages formosus (Asian bonytongue): 108925168
Help
Entry
108925168 CDS
T04919
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108925168 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108925168 (trim54)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108925168 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
Prok-RING_4
CYP38_PsbQ-like
Zn_ribbon_FGT1_2
RRF
DUF5799
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108925168
NCBI-ProteinID:
XP_029108776
UniProt:
A0A8C9R0K9
LinkDB
All DBs
Position
1:complement(47760862..47773913)
Genome browser
AA seq
357 aa
AA seq
DB search
MNFGPAHKPLAADSAPMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANP
LWQSRGSAAMSAGGRFRCPSCRHEVVLDRHGVFGLQRNLLVENIIDIYKQESSRPVQLKS
EQRMMCEDHVDEKINIYCLSCETPTCSMCKVFGAHRDCQVAPLQAVYERQKAELSDGIAM
LVASNDRVQALISQLEDIGKTVEENGRRQKQQLCSGFDALYAVMEERKQELVRRISQEQD
EKLGHVRALIRRHGDHLEAAVKLVEDAIRSMEEPQMAVFLQNTKEVFQKIGDAAGTSAIE
RTEPGYESMAHFVIDSDAVTSGLRAIDFQAVPEDEEEGDGGEEPESHPDLAGESGRL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgggccagctcacaagccgctggcggcggactccgctccgatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcctgtggtcatcctg
ccctgccagcacaacctgtgcaggaaatgcgccaacgacatcttccaggctgcaaaccct
ttgtggcagtcgcgggggtctgcagccatgtctgctggggggcgcttccgttgcccgtcc
tgtcgccacgaggtggtcctggaccgtcacggcgtcttcggcctgcagcgcaacctgctg
gtggagaacatcatcgacatctacaagcaggagtccagtaggccggtccagctcaagtcg
gagcagcggatgatgtgcgaagaccacgtggacgagaagatcaacatctactgcctgagc
tgcgagacgcccacctgctccatgtgcaaggtgtttggggcgcacagggactgtcaggtg
gcgccgctgcaggccgtctacgagaggcagaaggcggagctcagcgacgggatcgccatg
ctggtggccagcaacgaccgcgtccaggcactcatcagccagctggaggacatcggcaag
accgtcgaggagaacggccggcggcagaaacagcagctgtgctccgggttcgacgccctc
tacgctgtgatggaggagcgaaaacaggagctggtgcggcgcatcagccaggagcaggac
gagaagctgggccacgtgcgcgcgctcatccgtcgccacggcgaccacctggaggcggcg
gtcaagctggtggaggacgccatccggtctatggaggagccgcagatggccgtcttcctg
cagaacacgaaggaggtgttccagaagatcggggatgctgccgggacctccgctatcgag
cgcacggagcccggttacgagagtatggcgcacttcgtcatcgacagtgacgccgtcacc
agcgggctgcgggccatcgatttccaggcagtgcctgaggatgaggaagaaggggatggt
ggggaagaaccggagtcccatcctgacctggctggagaatctgggagactgtag
DBGET
integrated database retrieval system
