Scleropages formosus (Asian bonytongue): 108925235
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Entry
108925235 CDS
T04919
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108925235
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108925235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
108925235
NCBI-ProteinID:
XP_018592575
UniProt:
A0A8D0CGY9
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Position
13:complement(3629767..3637179)
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AA seq
845 aa
AA seq
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MLEVSSGNQNVMTAWSMVGKQKMEKRSSRAELSTPKEALDGSGDSEDGTSSESEAEQVSS
SRHKKETFISAKPHRQLCRSPCLDRPSFSQSNTLQELCADDSRLSTGKPSADKGYQAKMD
FALKLGYSGEQVETVLHKLGPDALINDILAELVRLGNKGDAETQASGCTNMTTSTSSGTG
TLIPRNPCPKEITSPEVSLEDESMDNLDNLRPVVIDGSNVAMSHGNKEVFSCRGIQLAVD
WFLEKGHNDITVFVPAWRKEQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYD
DRFIVKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHG
PSLENFLRKRPVIPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLTA
VKTMSEGALAKCGAGLASAKAESSSETKRIAPKRQSDPSIRSVACEPEERLSVTRKSEAS
SVPSLVTALSVPTMQATKSHAAGALNTRSASSPVPGSSQFSGSSLEHMSSMQYPPILVTN
SHGASVSYNEPFTKYDSVSDHGYYSMMSDFSSISLGSMQNTDSFYSMEHEHPMYQKNHSN
CESFSSYGEPYIGSVDSSMDENMKGHSSSSQNRLQPFAHGFSHEALTRVQSYGQEEPKQT
LRKQSHLAPHLQHPVVGARSSCPGDYPVPQNIHPSSTSQPGRSLGMTRMDSISDSRLYES
NPTRQRRPPLCREQHASWDPLPCGTESYGHLSYPLSSSLMQPCCERVMVRSMPDRMEQIW
RSPWEGVSAEHQEHQVIPEHQYQTYRNLCNIFPSYVVHSVMEKHPHLTDPQELAAVIVCQ
LRSER
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtctcgagtgggaatcaaaatgttatgacagcttggtccatggtggggaaa
cagaagatggagaagcggtcctccagggcagaactgagcacgccaaaggaggccctggat
ggcagcggggactcggaggatggcaccagctcggagagtgaggcagagcaggtgagcagc
tcccgccacaagaaggagacttttatttctgccaaaccccaccggcagctctgtcgctcg
ccatgtttggaccggccaagcttctcccagagtaacacactgcaggaactttgcgctgat
gactctaggctcagcactggaaagcccagtgctgacaagggctaccaggcaaagatggat
tttgctttgaagcttggatactcgggagaacaggttgagacggtgctgcacaaactggga
cctgacgccctgatcaacgacatcctggcagagctggtgagattggggaacaagggtgat
gctgagacccaagccagtggctgcaccaacatgaccaccagcactagcagtgggaccggc
acgttgatacctcgtaatccctgtcctaaggagatcaccagccctgaagtatctctagag
gatgaatccatggacaatctggacaatcttagacctgttgtcattgatggttctaatgtg
gcaatgagccatggcaacaaagaagtgttctcttgccgaggcattcagttggcagtagac
tggttcctggagaaagggcacaatgacatcacagtgtttgtcccagcctggcgaaaagag
cagtcccgaccagatgcccctatcacagaccaagaaattttgagaaaacttgaaaaagag
aagatcctggtattcacgccgtcaaggagagtgcagggcaggagggtggtctgctatgat
gatcggttcatagtaaaactggcatatgattcagatggcatcattgtgtccaacgataac
tacagggacttgcagaatgagaaaccagagtggaagaagttcattgaggaacgtcttctc
atgtattcctttgtaaatgacaagttcatgccaccagatgatcctcttggcagacatggc
cctagtctggaaaatttcctcagaaaaagacctgtcattccagagcacaaaaagcagcca
tgtccatatgggaagaaatgcacttatggacataagtgcaagtactaccaccctgaacga
gtaaaccagccgcaaagatctgtggcagatgaactacgcgcgtttgccaagctgacagct
gtgaaaacaatgagtgagggcgccctggctaagtgtggagctggccttgcatctgcaaaa
gctgagagcagttcagaaaccaagcgcattgctccgaagcgccagtcggaccccagcatt
cgctcggtggcttgtgagcccgaggagaggctttctgtcacccggaagtccgaggctagc
tccgtgccttccctggtgacagcgctcagtgttccaactatgcaggccaccaaaagccac
gcagctggcgccttgaacacccgctctgccagcagtccggtgcctgggtcttcacagttc
tctggcagctccctggagcacatgtccagcatgcagtacccgcccatcctggtcaccaat
agccatggcgcctctgtcagctacaatgagccattcactaagtacgactcggtgagcgat
cacggctactactccatgatgagcgacttctccagtattagcttgggcagcatgcagaac
acagacagcttctacagcatggagcatgagcatcccatgtaccagaagaaccactccaac
tgtgagtccttctcctcctacggggagccctacataggttctgtggacagcagcatggat
gagaacatgaagggtcactcgtcatcctcacaaaacaggctgcagccctttgcgcatggg
ttcagccatgaagccttgaccagggtccaaagctatggtcaggaggagccgaagcagacg
cttcgcaagcagtcacacctggccccacatttgcagcacccggtggtaggggctcgttcc
agctgccccggggactaccctgtaccacagaacatccacccctcatccacctcccagccc
ggacgctccctaggcatgacccgcatggacagcatctccgactcacgcttgtacgagagc
aaccccacaaggcagaggaggcctccgctgtgccgtgaacagcacgcaagttgggacccg
ctgccctgtggcacggaatcctacgggcatctgtcctacccactgagcagcagcctgatg
cagccatgctgtgagcgtgtgatggtgcgtagtatgcctgacaggatggagcagatctgg
cgctcgccctgggaaggtgtgtccgctgagcaccaggaacaccaagtcatcccagagcac
cagtaccagacctaccggaacctctgcaacatcttcccctcatatgttgtgcactcggtc
atggagaagcacccccacctgactgacccccaagaacttgctgccgttattgtttgtcag
ttgaggtcagaacgctaa
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