Scleropages formosus (Asian bonytongue): 108925375
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Entry
108925375 CDS
T04919
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108925375
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108925375
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108925375
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108925375
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108925375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cry1Ac_dom-VII
Motif
Other DBs
NCBI-GeneID:
108925375
NCBI-ProteinID:
XP_018592752
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Position
13:complement(6544122..6548103)
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AA seq
842 aa
AA seq
DB search
MGWINLLQNVFSIIMIRGILCMTSEIQLEVQEELEEGIGVGTLASDFLPPYKYLTPDDYF
RLDSVTGDLYMTAHRMDRESLCPRKDPEGCLRKYVAIIGPEENIVQVTVKVQDINDNAPI
FYASEIHLSVPEDVAVGVTFALDDSASDADEGINGEVWYKLDTESSFFVVNEKETSPVVV
VQKELDRETQSSHQLILLAIDRGSPPQTGTATLVVEVKDVDDNCPTFSPNSPQTVSIPGN
SPIGTVVTRVIATDADLGTNAMITYSFDARTSDKFYMDQDSGHITLLGIINTDVPLKYIL
RVLANGPFCPPVATQVTVSVLPVVSEQPVIKIKFIAEHRNQTLLLQENKPPTVLAVLELT
KASGITGTLSIEGDVPFLLKPHKGKYHLLPSSPLDFEQKHEYDISLVYNDAGVSKFGPKT
VIPVLVEDVNDNAPQFQQMQFKVEVLENNQPGAPLVQVKATDVDSLQNGKVVYRLSPDAE
GLFGIDRMTGQLYAMVALDREHQEYYSIIVVAQDNGSPPLEATATVSIQVLDQNDNAPVF
LSPSFIFFIPENIPLLARVGLVAAEDADKGQNGKVEVHVLNGSSSFVMDNIQGTVRCTAE
LDRERQDRYELWLLARDWGRPSLSSTVKVTVFVEDVNDNYPHIILPNSNLSCLTVSPDMT
KGATITRIHAIDADSGINSDISYHIGACDPPNSLFSIDPHSGNITLAQYLLLRDHGIHRL
LIVVRDGGRPTPLESTVWVNLLVNKSVEPCHVSDVPTVPPTFLPLKSKCDMDEISSEQAW
LILMIGLSMIAFSFIMLLGAGLICLKQRTTRSKRKRNKSKDNKINLKLMENCQTDMFELT
GG
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggctggatcaatctgctgcagaatgtgttcagtattatcatgatcagaggaatattg
tgcatgacctctgagattcagctggaggtccaggaggagttggaggagggtatcggggtt
ggcacccttgccagtgacttcttgccaccatacaagtatctcacaccagatgattacttt
agactagatagcgtcacgggggacttatacatgaccgcacacagaatggaccgggaatcc
ctgtgccccagaaaggatccagaaggctgtctccgcaagtatgttgccatcattgggcct
gaggagaacattgtccaggtcactgtgaaggtgcaggatattaacgataatgcacccatc
ttctatgctagcgagattcacctcagtgtcccagaggatgtggctgtgggggtcactttt
gcacttgatgacagtgcttcggatgcagacgaaggcatcaacggagaggtgtggtacaaa
ctggacaccgaaagcagcttctttgttgtgaatgagaaagaaacatctccagttgtggtt
gttcagaaagagctggaccgggagacacaaagctcccatcaactgatcctcctcgccatc
gaccgtggatccccgccacagactggcacagccactttggttgtggaggtgaaagatgtc
gatgacaattgcccaacattctcacccaacagcccccaaactgtgtctattccagggaac
tcacccatcggcacagtggtcacacgtgtcatagccaccgatgctgatctgggcaccaat
gctatgatcacatattcgtttgatgcaagaacctctgacaagttttacatggaccaagat
agcggacatatcaccttattaggcatcattaacactgatgtccctttgaagtatatactg
agagttctagcaaatggtccattttgccctcccgtagccactcaggtaactgtatctgtt
ctgccagtggtgagcgagcagccagtgatcaagattaagttcatagcagaacaccgaaac
cagactcttctgttacaggagaacaagccccctacagtcttggctgttctagaactcacc
aaggcttctgggattacaggcaccctatctattgaaggagatgtcccatttctgctaaaa
ccacataaaggcaaataccatctgctaccgtcaagtcctcttgactttgagcagaagcat
gaatatgacatttccttggtttacaatgatgctggagtctccaagtttggtcctaagaca
gtgattccagtcttggtggaagatgttaatgataatgctccccagttccaacagatgcag
tttaaagtagaagtgcttgagaacaaccaacctggggctcccctggtgcaggtgaaggcc
actgatgtagatagtctacagaatggcaaagtggtttacaggctgagccctgatgctgaa
ggcctgtttggaatcgaccgcatgaccggccagctctatgccatggttgctctggacaga
gaacaccaggaatactacagtatcatcgtggttgcccaggacaatgggtctccaccatta
gaggccactgccaccgtgtccatccaagtgttggaccagaatgacaatgctcctgttttc
ctgagcccaagcttcatcttcttcatcccagaaaacatccctctgttagctcgggtgggg
cttgtggcagctgaggatgcagacaaagggcagaatgggaaggtggaggttcatgtgcta
aatggcagcagctcctttgtgatggacaacatccaaggtacagtgcgctgcactgctgag
ctggaccgtgagcgtcaggatcgatatgagctatggctcctggccagggactggggacga
ccatccttgtcgtccactgtcaaggtcactgtctttgtggaggatgtcaatgacaactat
ccccacatcatcctccccaacagtaatctctcctgtctgactgtgtcacctgacatgacc
aagggagccaccatcaccaggatccacgccatcgacgcagactctggcatcaactcagac
atcagttatcacattggagcttgcgacccaccaaacagccttttcagtatagatccccac
tcaggtaatatcaccttggcccagtacctactgctgagggatcatgggatacatcgcctc
ctcattgtggtaagagacggtggcaggcccactccactggagtccactgtgtgggtcaac
ctgcttgtcaacaagtctgtggagccttgccatgtcagtgatgttcccacagttccccca
actttcctgcccctaaaaagtaaatgtgacatggatgaaataagtagtgaacaggcctgg
ctcatacttatgattggcctaagcatgattgcattttctttcatcatgcttcttggagct
ggattaatatgtttaaaacagaggactacaagaagtaaaaggaaaagaaataaaagtaag
gacaataaaataaatttgaaactaatggagaattgtcaaacagacatgtttgaattgaca
ggtggatga
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