Scleropages formosus (Asian bonytongue): 108925474
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Entry
108925474 CDS
T04919
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108925474
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108925474
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108925474
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108925474
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108925474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
108925474
NCBI-ProteinID:
XP_018592954
UniProt:
A0A8C9RMJ9
LinkDB
All DBs
Position
13:8307266..8493038
Genome browser
AA seq
1226 aa
AA seq
DB search
MDLPCEVYLLVVLFTCLVLQAQAQERDYTVREELPENVRIGNLRKDLDLALEPDVKLSSP
LQFKPVYKTGDVPLVRVEATTGDIYTTSNRIDREKLCSGVFNEKRCFYEIEVAVLPDEIF
RLVKIRFQIEDINDNAPLFQSTVINISIPENTAINSRYPVPSALDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTIS
DVNDNRPVFKDSEVEVNVPENAPVGTSVTQLHATDADLGPNAQIHFSFSNQISPATRQLF
AIDSTTGLITIKQPLDRELSPVHKLIVLASDGGSTPSRATVTVNITDINDNVPSIDTRYI
MNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFDNQFLLET
AAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISASDADSGRNAEITYTLGPNSPDGFNIDRRSGILSVGKRLDREKQDKYSFTV
IARDNGSPPLQNNVTVKVMVQDINDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSILNGKDNFIIDPKSGVIKPNITFDREQQSSYTFVVKAVDGGRPQCVSFAKVT
INVVDVNDNRPVFVIPSSNYSYDLVQSTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSS
KGLFAIDKTTGNITLQEKIVAGDQGLHRLIVKVKDLGQPESLYAIALVHLFVNETVSNAT
FIQEQLRKSLETPLDRNVGEGELITQTNSYVIVVIAVIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQNGEWVSPNQENRQIKKKKKKKKRSPKNLLLNFVTIEESKPDDPSHEHING
TLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGQIHTRQNQSQTPDKSFS
SIPPTCPHKTQRRVTFHLPDGSQESCSDSGLGDHEPTSSTSTTQPLPLGFPQEEYYEQTS
PNSRTEGDGNSDPESTIEVNLQRALAEASETCTQECLILGHSDSCWMPPALTQFQPAHNT
TRPTFGLQQGWARGVKPDGRHTLGRSVPKDNLDKGSNRPQFYNTLERHCSKKEDPVKVIP
LANFTPSSQPTPVTGGTSAFVHEHQL
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggacttaccgtgtgaggtgtacctgctggtggttttgttcacctgtctggtgcttcag
gcccaggcccaagagagggactacacagtccgcgaagagttgcctgagaatgtgcgcatc
gggaacctccgtaaggacctggatctggctctggagccagatgtcaaactttcctcaccc
ctgcaattcaaacctgtgtacaagactggtgacgtgcctttggtgcgagtagaggccacc
acaggggacatctacaccacttccaaccgtattgatcgtgagaagctctgctcgggtgtc
ttcaatgagaagcgctgtttctacgagattgaggtggctgtgctgcctgatgagatattc
cgccttgtgaagatacgctttcagatagaggacattaacgacaatgcaccactcttccag
tcgaccgtcatcaacatctccattccagagaacacagccatcaactcccggtaccctgtg
ccatcagccctggacccagatgtggggatcaatggcattcaacactatgagcttgtgaag
agtgtgagtgaatttggcctggatatcatcgagacccctgagggtgacaagtggccccag
ctcattgtccaacagagtctggaccgtgaacagaaggacacatttgtgatgaaaatcaaa
gtggaagacggagggacgccgcccaaatcaagtactgccatcctccaagtcaccatctca
gatgtgaatgacaaccgcccagtcttcaaggacagtgaagtggaagtgaacgtccctgag
aatgccccagtcggcacatcggtcacccagctacacgccacagatgctgacctgggcccc
aatgcccagatccacttttctttcagcaaccagatctcccctgccaccaggcagctcttt
gccattgacagcaccactgggctgatcactattaagcagcccttggacagggagttgtcg
ccggtccacaagctcattgttctggcaagtgatggtggctccaccccttccagagccacg
gtaactgtcaacatcacagacattaatgacaatgtcccatccatcgacacgcgctacata
atgaaccctgtcaacggcactgtgctgttgtcagaaaacgctcctcttaacactaaaata
gctctaattacagtgacagacagggatgctgatctgaatgggaaagtgacatgctatacc
gaccatgatgttccatttcggttgaagcctgtctttgacaaccagtttcttttggaaacc
gctgcccctcttgattatgagacaacaagggaatatgccattaggatagtggcctccgat
tctggaaaacctccattaaacacgtcagctatggttctaataaagattaaggatgaaaat
gacaatgcccccatcttccctcagcctgaaattcagctctccatcccagaaaacaacgat
ccctcaacgcaactgataaaaattagtgcctccgatgcagacagtggccgtaatgcagag
attacgtatacactggggccaaattcacctgatggttttaacattgatcgacggtcagga
atcctttctgttgggaaaagactggacagggaaaagcaggacaagtactccttcactgtc
attgcaagggacaatggctcccctcccctacaaaacaatgtcactgtcaaagttatggtt
caagacattaatgacaacagcccagccttcactcatcctgagtataacttttatgtgcct
gaaaacttgcccttgtatgggacagtaggcttaatcacagttacagatgcagatgctgga
gacaatgctgtggtcacactctcaatactgaatggcaaggacaatttcattattgatcca
aaatctggagtgatcaagccaaatattacttttgacagagaacaacaaagttcgtatact
tttgtggtaaaggcagtggatgggggtcggccacagtgtgtctcttttgctaaggttaca
ataaatgttgtagatgtgaatgacaacagaccagtttttgtcataccttcatcaaactat
tcctatgaccttgtccagtctactaccagcccaggatcagtggtaacacgagtctttgcc
atagacaatgacactggcatgaatgctgagctccagtacagtattattggagggtcttca
aaggggctgtttgcaattgacaaaacaacaggcaacattactctccaggaaaagattgtt
gctggtgatcaaggcttgcacagactaattgtcaaggtcaaggatctggggcagccggag
tctttatatgccattgctcttgtccatttatttgtgaatgagacagtttccaatgccaca
ttcatccaggagcagttgcgcaagagcctggagaccccattggatcgaaatgttggagag
ggtgagctcatcactcagaccaacagctatgtcattgtggtcattgctgtcattgcaggc
acaatgacggtcattctggtaatttttgtgactgccttagtgcgctgccgtcagacacca
aggcataaggtggtccagaagggcaagcagaatggtgagtgggtgtctccaaatcaggaa
aatcgtcaaatcaagaagaagaaaaagaaaaagaagaggtctcctaagaacctcctgctt
aactttgttaccatagaagaatctaagccagatgacccatctcatgagcatattaatggc
actcttgatctcccagtggagctggaggagcagacaatgggaaaatacaactgggccaca
actccaaccaccttcaaacctgatagcccagacttggcaaagcactacaagtccgcctcc
cctcagccaacctttcaaattaaaccagagacccctgtcgctcccaagaagcaccatgtc
attcaggagctccccttggacaacacctttgttgtgggctgtgactcactctccaagtgt
tcctccagcagctcagacccttacagcgtctcagagtgcagctgtcaagggggattcaag
gctcctgggcagatccacactcgccagaaccagagccaaactccagacaagtcattcagt
tctatcccacccacatgccctcataagacacagcgccgtgtgacctttcacctcccagat
ggctcccaagagagctgcagtgacagcggccttggtgaccatgaacccaccagcagcaca
agcaccacacaacccctgccacttggcttcccccaggaggagtactatgagcagacgtcc
ccaaacagtcgcacagagggagatggcaactccgacccagagtccactatagaggtgaac
ctccagcgagccctagctgaggcctcagaaacctgcacccaggagtgtctgatcctgggc
cactccgacagctgctggatgcccccagcgctgacccagttccagcctgcccacaacacc
acacggcccacctttggcttacagcaaggctgggcccgtggggtgaagccagacggtcgc
cacactctcggccggtcagtgcccaaagacaatctggacaaaggaagcaaccgtccacag
ttctacaacacgctggagagacactgcagtaagaaggaggaccccgtcaaggtcatcccc
ctggcaaacttcactccatcaagccagccgacaccagtcaccgggggcaccagcgccttt
gttcatgagcatcagctataa
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