Scleropages formosus (Asian bonytongue): 108925509
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Entry
108925509 CDS
T04919
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108925509 (rlim)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108925509 (rlim)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108925509 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108925509
NCBI-ProteinID:
XP_018593025
UniProt:
A0A0P7UJ06
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All DBs
Position
13:5809328..5817038
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AA seq
616 aa
AA seq
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MENKESAEQGASEQSEAQRRRQLDRLDREEAFYQFVNGLSDEDYRLMRDNNLLGNPGETT
EEELLSRLQQVKDGPENPNNSEGRNLEATGPDVPEEGSNGDSLLDWLNTVRRTGNTTRSG
HRGNQSWRAVSRTNPSSGDFRFSLEINVNRNITEQQPPTNDGEQPSGETEGSSRLGTEPE
TPMETTQVVEEPVVEDLAVIVEPEQPEPDSPPVARPSSPLVPAPNPPSPRVEETPRRGQR
RARSRSPDLRRTRMRSERSRSPLNLDRLDGLTPAVHQPPLHSPTPILDAPAEGSSRTRHH
VVFRHSASELDSQSRAAAELAPPSQEADNGGSAGGAAGRRPPTIMLDLQVRRVRPGEYRT
RDSIANRTRSRSQTSNNTFLYESEQGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLS
EATSMALQSMIRQIMTGFSELSYFMDSDSEALDSSRGSGQPPEQAEGQAAPASPTEPSVG
PGTGSSQDVAAPRTEERSGVGGRAGPRGPVSFEESGSLPFLRLAHFFLLNDDDEEQPRGL
TKEQIDNLATRNFGENDALKTCSVCITEYAEGHKLRKLPCSHEYHVHCIDRWLSENSTCP
ICRRAVLSSRERESVV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaagagagtgcagagcagggggccagcgagcagtcagaggcacagcgtcgc
cgccagcttgaccggctggaccgagaagaggccttctaccagtttgtgaacggcctgagt
gatgaagactaccgcctaatgagggataataatttgttaggaaatcctggtgaaaccact
gaagaggaactcttgagtcgacttcagcaagtcaaagatggacccgaaaatccaaataac
tctgaaggcagaaatttggaggccactggaccagatgttcctgaggagggttctaatgga
gactcccttcttgattggttgaacactgttaggcggacaggcaacacaactcggagtggg
caccggggcaaccagtcttggagagctgtgagcaggaccaaccccagcagcggtgacttc
cgctttagcctcgagataaatgtcaatcgtaacattactgagcagcagccaccgactaat
gatggagaacagcccagtggggagacagaggggtccagtaggcttgggacagagccagag
acacccatggaaacgacacaggtggtggaggagccagtggttgaggatctggctgttatt
gtggagccggaacagcctgaacctgacagtcctcctgttgccagaccttccagccctttg
gtcccagcccccaatcccccaagtcctcgggtggaggagacaccccgcaggggtcaaagg
agagccagaagccgcagcccagatcttcgacggaccagaatgcgaagtgagaggagccgc
tctccactgaacctggaccggctggacggtctgacccccgctgtccaccagccaccctta
cacagccccacccccatcttggatgcaccagcggagggcagttctaggactcgacatcat
gtggtttttcgccacagtgcctccgagttggactcccagtcgagagcagctgccgaactg
gctccaccctcccaagaagctgataacggcggaagcgcgggaggagcagctggcagaagg
ccccccaccatcatgttggacctgcaggtacgaagggtgcgacctggcgaataccgcaca
agggacagcatagccaaccgcacacgttctcgttcgcagacctccaacaacaccttcctg
tacgagagtgagcaaggtggttttcgacggactttctcacgctcggagcgggctggcgtg
cgcacctatgtcagcactatccgcatccccatccgtcgcatctcagatgctggtctgagc
gaggccacctccatggctctgcaatccatgatccggcagattatgacaggcttcagtgag
ctcagctacttcatggattctgactctgaggctctggactccagccggggctctggacag
cctcccgagcaagctgaggggcaggcggctccagcttccccaacagagccctctgtcggc
cctggcacaggctcgagccaggacgttgctgctccacggacagaggaaaggtctggggtg
ggtggccgggcagggccacgggggcctgtcagtttcgaagagtctggctccttgcccttc
ctccggctagctcacttcttcctgctcaatgatgatgatgaggagcagccacggggcctc
accaaggagcagatcgacaacctggccacccgcaactttggggagaacgatgccctgaag
acatgcagcgtgtgcatcaccgaatacgcagagggccacaagctgcgcaagctgccctgc
tcccacgagtaccatgtccactgcatcgaccgctggctctctgagaactccacctgcccc
atctgccgcagggctgtgctctccagccgggagagggagagcgtagtgtag
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