Scleropages formosus (Asian bonytongue): 108925744
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Entry
108925744 CDS
T04919
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108925744 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108925744 (cnot3)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108925744 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108925744 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
108925744
NCBI-ProteinID:
XP_018593479
UniProt:
A0A8C9QP75
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Position
18:18476992..18486152
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AA seq
930 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTSTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRFIEKHRYHI
RMLETILRMLDNDSVQVESIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDISASVVA
TSPPGHSHMEDEIFLHSSSTPTSTTSSSPIPPSPATCTMDNSEDDKKRGRSTDSEVSQSP
VKNGNPSLSSSSSSSSSSSGTSSSSLVTLAPVTGGSGAVSGSSGHMGGIGGLLHSPGSFS
AAIQQQPSQQQNQQQQSSQAKHSSVSGAPSGSNPSPSNHFHLPASTASSPPNSNTPGTAS
QNSQPQAPSGPTASSSLGAGLSKSGMTGANGTNQVGLPVMPPSVNTMATPYAQAAAAGGV
GSGLGGSVGGNTGSAGSSVGGTAGNNNGSGSSSSLLGSASGLGCASSGIVGHGSGQTVTQ
GSAQVALSPASVAPGSAVGAIGSSVGTAGTSGGGSGLPVRPPSGQKQNGNTSYSAVVADS
MPDSTLNSASQSQSSQPSALGSAANPPKDNSSSLLDSMTLPPSSPSPSYSENKQANSSLQ
NGPHSYTAGSEGIKLATDLRQILMGTRAGPQLGEQPGPIAASTNTRKRKQCQAPEPLSSL
KSMAERAALGSSLEGDMPGLHLPDRDIFSGSGAPSGLPAAPQPSLSEVSIPPSLGVCPLG
PVPLSKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEFY
QRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGT
YIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagagaaaactacaaggtgaaatagatcgatgtctcaaaaaggtagcagaa
ggtgtagaacagttcgaagacatttggcaaaagcttcacaatgcagccaatgctaaccaa
aaggaaaaatatgaagcagatctcaagaaagagattaaaaaattacagcgactacgagac
cagataaaaacatgggtggcgtctaatgagatcaaagacaaaagacagcttgtggaaaat
cgcaaacttattgagacgcaaatggagcgctttaagattgtggagcgggaaacaaagaca
aaggcttactccaaagaaggcctgggtctggcacagaaggtagaccctgctcagaaagag
aaggaagaggttggccagtggctcactagtacaatagacactctaaatatgcaggtggac
cagtttgagagcgaagtggagtctctttctgtccagacccgtaagaagaaaggggacaaa
gagaagcaagaccgcattgaagagttgaaacgtttcattgaaaagcacaggtaccacatc
cgaatgctggagaccatcctgcgaatgctggacaatgactcagtgcaagtggaatcgatc
cgcaagatcaaggatgatgtggagtactatctcgactcttctcaggaccctgactttgag
gagaatgagttcctctacgatgaccttgaccttgaggacatctctgcctccgtggttgcc
acctccccacctggccactctcacatggaggatgagattttcctgcactcaagcagcacc
ccaacatccaccacctcctcgtcaccaatacccccttccccagccacttgcactatggac
aactcagaagatgataagaaaaggggacgttctacagacagtgaagttagccagtcacct
gtgaagaatggcaatccttcattgtcatcatcatcatcatcctcttcttcctcttctggg
acctcttcttcctcactggtcaccttggccccagttacagggggcagtggggctgtctca
gggagcagtggccatatgggtggtattggcgggctcttgcacagccctggcagcttcagt
gcagcgattcagcagcagccatcacaacagcaaaaccaacagcagcagtcatctcaagcc
aaacactcctctgtctctggagcaccttctggcagcaatccgagcccatcaaatcacttt
catcttcctgcatcaactgcctcatctcctccaaattccaataccccaggcactgctagc
caaaactcccaacctcaggctccatctgggcccactgcttcctccagtctaggcgctggt
ctgagcaagagtggtatgacaggggcaaatggtacaaaccaagtaggcctccctgtgatg
ccgccatcagtgaacaccatggctacaccgtatgctcaggcagctgctgctggaggggtg
gggagtgggcttggagggtcagttggaggaaatactggtagtgctggctccagtgtaggg
ggcactgcaggcaataataatggaagtgggtcttcctcgagtttgctgggttctgcttct
ggacttggttgtgccagcagtgggattgtaggacatggctcaggacaaacggtcactcag
ggctcagcacaagtggccctgagtccagctagtgtggctcctggaagcgcagtgggagca
attggcagcagtgtggggactgcagggacgagtggaggagggagcggccttcctgtcaga
ccaccaagtggacagaaacagaacggtaacacaagttacagtgctgttgtagctgacagc
atgccagactccacccttaacagtgccagccaatcacaaagcagccagccctctgccttg
ggctctgcggccaatccacctaaagacaacagctccagcctcttggattctatgaccctg
ccccctagttccccttctccgtcctacagtgaaaacaagcaagccaacagcagcctgcag
aatggccctcactcctacaccgcaggttcagagggcatcaagctcgctacagatctccgt
cagatactgatgggtacgagggctggaccacagctaggagagcaacccggaccaattgca
gcatccacaaacactcgaaagagaaagcagtgtcaggctccggagcccctaagctctctg
aagtccatggctgagcgagcggcactgggttccagcctagagggagacatgcctggcctg
cacctccctgacagagacatcttttctggatcaggtgcaccttctggactgccagcagct
ccccaaccatctctttctgaggtcagcatccccccttcactgggagtgtgtcctctgggc
cctgttcctctgtccaaagaccagctgtatcagcaggccatgcaggagtctgcatggacc
cacatgccccacccctctgactcagaaaggataaggcagtacctgatgaggaatccgtgc
cccaccttgccttttcaccaccaggtgcctcctcctcactcagattctgtggaattctat
cagagactctcaaccgagacacttttcttcatattctactacctggagggcactaaggca
cagtatctggcagctaaggctttgaaaaagcagtcctggcggttccacacaaagtatatg
atgtggttccaaaggcatgaagagcccaaaaccatcacagatgagtttgaacaggggaca
tacatttactttgattatgaaaaatggggccagaggaagaaggagggattcacatttgag
taccggtaccttgaagaccgtgacctgcagtga
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